RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	TCIRG1	Q13488	830 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	MTX1	Q13505	466 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	HDGFL1	Q5TGJ6	251 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	DMRTA1	Q5VZB9	504 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	RUFY3	Q7L099	469 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	NLRP10	Q86W26	655 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	SULF1	Q8IWU6	871 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	RHPN1	Q8TCX5	695 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	PIBF1	Q8WXW3	757 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	RILPL2	Q969X0	211 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	PKNOX2	Q96KN3	472 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	UPF3B	Q9BZI7	483 aa	Known RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	ZMYND15	Q9H091	742 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	FAM217B	Q9NTX9	383 aa	Predicted RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	SEPT9	Q9UHD8	586 aa	Predicted RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	TRMT112	Q9UI30	125 aa	Known RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	AFDN	P55196	1824 aa	Known RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	TTC41P	Q6P2S7	1318 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	PPEF1	O14829	653 aa	Predicted RBP	9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	BBOX1	O75936	387 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	UBTFL1	P0CB47	393 aa	Predicted RBP	9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	HCLS1	P14317	486 aa	Predicted RBP	9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	AK2	P54819	239 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	UBE2H	P62256	183 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	KIAA2012	Q0VF49	1180 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	EAPP	Q56P03	285 aa	Predicted RBP	9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	ANKRD13D	Q6ZTN6	518 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	PNMA8A	Q86V59	439 aa	Predicted RBP	9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	LDHD	Q86WU2	507 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	GPC2	Q8N158	579 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	LARGE2	Q8N3Y3	721 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	RNF214	Q8ND24	703 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	MYRIP	Q8NFW9	859 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	KIF1BP	Q96EK5	621 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	TM6SF1	Q9BZW5	370 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	NBPF3	Q9H094	633 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	SNRK	Q9NRH2	765 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	CHPF2	Q9P2E5	772 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	DBF4	Q9UBU7	674 aa	Predicted RBP	9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	RABGEF1	Q9UJ41	708 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	HACL1	Q9UJ83	578 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	ATP6V0A2	Q9Y487	856 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	ZNF541	Q9H0D2	1346 aa		9.29	□□□□□ -0.92
SPIDR-223	ENST00000524033	LARGE1	O95461	756 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	EPHX2	P34913	555 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	EIF6	P56537	245 aa	Known RBP	9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	BEND3	Q5T5X7	828 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	DDX46	Q7L014	1031 aa	Known RBP	9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	RDH13	Q8NBN7	331 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	PLBD2	Q8NHP8	589 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	PRIMPOL	Q96LW4	560 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	PCMTD1	Q96MG8	357 aa	Predicted RBP	9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	TMUB1	Q9BVT8	246 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	GDPD2	Q9HCC8	539 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	HYPK	Q9NX55	129 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	LIMCH1	Q9UPQ0	1083 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	MTMR6	Q9Y217	621 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	CNPY2	Q9Y2B0	182 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	GJA3	Q9Y6H8	435 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	LAMA4	Q16363	1823 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	CCDC171	Q6TFL3	1326 aa		9.28	□□□□□ -0.92
SPIDR-223	ENST00000524033	STX6	O43752	255 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	RNF40	O75150	1001 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	SYT1	P21579	422 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	HMGN5	P82970	282 aa	Known RBP	9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	DPP8	Q6V1X1	898 aa	Predicted RBP	9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	NOL8	Q76FK4	1167 aa	Known RBP	9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	SP8	Q8IXZ3	490 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	CNTROB	Q8N137	903 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	VPS33B	Q9H267	617 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	IL1RAPL2	Q9NP60	686 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	SH3TC1	Q8TE82	1336 aa		9.27	□□□□□ -0.93
SPIDR-223	ENST00000524033	RIC1	Q4ADV7	1423 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	C3orf80	F5H4A9	247 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	ATP5J2-PTCD1	G3V325	749 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	PPIP5K2	O43314	1243 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	GLRX3	O76003	335 aa	Known RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	ADCY5	O95622	1261 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	ITGBL1	O95965	494 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	LMOD1	P29536	600 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	RBM10	P98175	930 aa	Known RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	HSP90AB4P	Q58FF6	505 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	VPS53	Q5VIR6	699 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	SLC51A	Q86UW1	340 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	NIM1K	Q8IY84	436 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	SUPT20H	Q8NEM7	779 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	FAM89A	Q96GI7	184 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	ZSCAN31	Q96LW9	406 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	SLC4A5	Q9BY07	1137 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	TMEM134	Q9H6X4	195 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	SH2B1	Q9NRF2	756 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	USP25	Q9UHP3	1055 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	VPS9D1	Q9Y2B5	631 aa		9.26	□□□□□ -0.93
SPIDR-223	ENST00000524033	ANKRD31	Q8N7Z5	1873 aa		9.25	□□□□□ -0.93
SPIDR-223	ENST00000524033	TMEM88B	A6NKF7	163 aa		9.25	□□□□□ -0.93
SPIDR-223	ENST00000524033	GOLGA8CP	A6NN73	597 aa		9.25	□□□□□ -0.93

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