RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 TMEM39BQ9GZU3 492 aa12.37□□□□□ -0.43
NECAB1-206ENST00000523962 F6X3S4 739 aa12.36□□□□□ -0.43
NECAB1-206ENST00000523962 CRKP46108 304 aa12.36□□□□□ -0.43
NECAB1-206ENST00000523962 GYG1P46976 350 aa12.36□□□□□ -0.43
NECAB1-206ENST00000523962 UBE4AQ14139 1066 aa12.36□□□□□ -0.43
NECAB1-206ENST00000523962 EPHA10Q5JZY3 1008 aa12.36□□□□□ -0.43
NECAB1-206ENST00000523962 BEND3Q5T5X7 828 aa12.36□□□□□ -0.43
NECAB1-206ENST00000523962 FAM84BQ96KN1 310 aaPredicted RBP12.36□□□□□ -0.43
NECAB1-206ENST00000523962 ZNF646O15015 1829 aaPredicted RBP12.36□□□□□ -0.43
NECAB1-206ENST00000523962 VAMP4O75379 141 aa12.35□□□□□ -0.43
NECAB1-206ENST00000523962 CETPP11597 493 aa12.35□□□□□ -0.43
NECAB1-206ENST00000523962 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
NECAB1-206ENST00000523962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.35□□□□□ -0.43
NECAB1-206ENST00000523962 SH3TC2Q8TF17 1288 aa12.35□□□□□ -0.43
NECAB1-206ENST00000523962 KIAA0100Q14667 2235 aaKnown RBP12.35□□□□□ -0.43
NECAB1-206ENST00000523962 IL16Q14005 1332 aa12.35□□□□□ -0.43
NECAB1-206ENST00000523962 SPEF2Q9C093 1822 aa12.34□□□□□ -0.43
NECAB1-206ENST00000523962 H0YGN5 161 aa12.34□□□□□ -0.43
NECAB1-206ENST00000523962 TLR2O60603 784 aa12.34□□□□□ -0.43
NECAB1-206ENST00000523962 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
NECAB1-206ENST00000523962 MYH3P11055 1940 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 GRM8O00222 908 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 FRAT2O75474 233 aaPredicted RBP12.33□□□□□ -0.44
NECAB1-206ENST00000523962 GNRH1P01148 92 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 PRMT2P55345 433 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 LACTBP83111 547 aaPredicted RBP12.33□□□□□ -0.44
NECAB1-206ENST00000523962 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
NECAB1-206ENST00000523962 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 VPS37DQ86XT2 251 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
NECAB1-206ENST00000523962 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
NECAB1-206ENST00000523962 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
NECAB1-206ENST00000523962 IRF6O14896 467 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
NECAB1-206ENST00000523962 CACNB3P54284 484 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 HDLBPQ00341 1268 aaKnown RBP12.32□□□□□ -0.44
NECAB1-206ENST00000523962 GRIK5Q16478 980 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 DPF3Q92784 378 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
NECAB1-206ENST00000523962 HOOK2Q96ED9 719 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 WRNIP1Q96S55 665 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 TMOD2Q9NZR1 351 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
NECAB1-206ENST00000523962 SNCAIPQ9Y6H5 919 aa12.32□□□□□ -0.44
NECAB1-206ENST00000523962 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
NECAB1-206ENST00000523962 HOXD10P28358 340 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
NECAB1-206ENST00000523962 PPIL2Q13356 520 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 MRIQ9BWK5 157 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 RIPOR2Q9Y4F9 1068 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 FANCIQ9NVI1 1328 aa12.31□□□□□ -0.44
NECAB1-206ENST00000523962 HTTP42858 3142 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 PSMC4P43686 418 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 MTFR1Q15390 333 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 CCDC184Q52MB2 194 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 CAVIN4Q5BKX8 364 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 SLC4A10Q6U841 1118 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 C17orf99Q6UX52 265 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 FAM83AQ86UY5 434 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 CPA4Q9UI42 421 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
NECAB1-206ENST00000523962 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
NECAB1-206ENST00000523962 FMNL1O95466 1100 aaPredicted RBP12.29□□□□□ -0.44
NECAB1-206ENST00000523962 PPATQ06203 517 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 MIGA2Q7L4E1 593 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 RAET1EQ8TD07 263 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 ZDHHC15Q96MV8 337 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 ZNF341Q9BYN7 854 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 SRCIN1Q9C0H9 1055 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 SRRDQ9UH36 339 aa12.29□□□□□ -0.44
NECAB1-206ENST00000523962 GRK4P32298 578 aa12.28□□□□□ -0.44
NECAB1-206ENST00000523962 BCAMP50895 628 aa12.28□□□□□ -0.44
NECAB1-206ENST00000523962 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
NECAB1-206ENST00000523962 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
NECAB1-206ENST00000523962 ANKRD23Q86SG2 305 aa12.28□□□□□ -0.44
NECAB1-206ENST00000523962 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
NECAB1-206ENST00000523962 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
NECAB1-206ENST00000523962 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
NECAB1-206ENST00000523962 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
NECAB1-206ENST00000523962 FAM205CA6NFA0 338 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 PDHXO00330 501 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 OSBPP22059 807 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 CTGFP29279 349 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 INPP5BP32019 993 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 LRRC24Q50LG9 513 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
NECAB1-206ENST00000523962 SHISA4Q96DD7 197 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms