RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ALDH1B1P30837 517 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 MCTP1Q6DN14 999 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 CYB5R4Q7L1T6 521 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 C2CD5Q86YS7 1000 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 WDR19Q8NEZ3 1342 aa24.54■■□□□ 1.52
SQLE-206ENST00000523430 B4E1Z4 1266 aa24.54■■□□□ 1.52
SQLE-206ENST00000523430 SPTY2D1Q68D10 685 aaPredicted RBP24.54■■□□□ 1.52
SQLE-206ENST00000523430 ZNF622Q969S3 477 aaKnown RBP eCLIP24.54■■□□□ 1.52
SQLE-206ENST00000523430 JAK2O60674 1132 aa24.53■■□□□ 1.52
SQLE-206ENST00000523430 LDHBP07195 334 aaKnown RBP24.53■■□□□ 1.52
SQLE-206ENST00000523430 NAP1L2Q9ULW6 460 aaPredicted RBP24.53■■□□□ 1.52
SQLE-206ENST00000523430 TRAK2O60296 914 aa24.52■■□□□ 1.52
SQLE-206ENST00000523430 RIMBP2O15034 1052 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 ZSCAN22P10073 491 aaPredicted RBP24.51■■□□□ 1.51
SQLE-206ENST00000523430 PDIA3P30101 505 aaKnown RBP24.51■■□□□ 1.51
SQLE-206ENST00000523430 EVCP57679 992 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 PPARAQ07869 468 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 AKNAD1Q5T1N1 836 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 STAG1Q8WVM7 1258 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 BRPF3Q9ULD4 1205 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 BAZ2AQ9UIF9 1905 aaKnown RBP24.51■■□□□ 1.51
SQLE-206ENST00000523430 GOLGA6L22H0YM25 854 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 SMIM22K7EJ46 135 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 CHRNA5P30532 468 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 CCT2P78371 535 aaKnown RBP24.51■■□□□ 1.51
SQLE-206ENST00000523430 DIXDC1Q155Q3 683 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 STK11IPQ8N1F8 1099 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 MPNDQ8N594 471 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 ZNF274Q96GC6 653 aaPredicted RBP24.51■■□□□ 1.51
SQLE-206ENST00000523430 NCOA5Q9HCD5 579 aaKnown RBP24.51■■□□□ 1.51
SQLE-206ENST00000523430 MTMR6Q9Y217 621 aa24.51■■□□□ 1.51
SQLE-206ENST00000523430 LAMB1P07942 1786 aa24.5■■□□□ 1.51
SQLE-206ENST00000523430 DPP8Q6V1X1 898 aaPredicted RBP24.5■■□□□ 1.51
SQLE-206ENST00000523430 KLF18A0A0U1RQI7 1052 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 H0YIN7 160 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 FOXD4L6Q3SYB3 417 aaPredicted RBP24.49■■□□□ 1.51
SQLE-206ENST00000523430 STYK1Q6J9G0 422 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 TMED8Q6PL24 325 aaPredicted RBP24.49■■□□□ 1.51
SQLE-206ENST00000523430 FOXD4L3Q6VB84 417 aaPredicted RBP24.49■■□□□ 1.51
SQLE-206ENST00000523430 CYP2D7A0A087X1C5 515 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 MINDY4BA8MYZ0 360 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 SH2B2O14492 632 aaPredicted RBP24.49■■□□□ 1.51
SQLE-206ENST00000523430 CTDNEP1O95476 244 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 MFSD6Q6ZSS7 791 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 NSUN7Q8NE18 718 aaKnown RBP24.49■■□□□ 1.51
SQLE-206ENST00000523430 SLX4Q8IY92 1834 aa24.49■■□□□ 1.51
SQLE-206ENST00000523430 VPS37CA5D8V6 355 aaPredicted RBP24.48■■□□□ 1.51
SQLE-206ENST00000523430 GOLGA8BA8MQT2 603 aa24.48■■□□□ 1.51
SQLE-206ENST00000523430 KDM4AO75164 1064 aa24.48■■□□□ 1.51
SQLE-206ENST00000523430 F13A1P00488 732 aa24.48■■□□□ 1.51
SQLE-206ENST00000523430 CRNKL1Q9BZJ0 848 aaKnown RBP24.48■■□□□ 1.51
SQLE-206ENST00000523430 CNNM2Q9H8M5 875 aa24.48■■□□□ 1.51
SQLE-206ENST00000523430 ANGEL1Q9UNK9 670 aaKnown RBP24.48■■□□□ 1.51
SQLE-206ENST00000523430 RRP12Q5JTH9 1297 aaKnown RBP24.47■■□□□ 1.51
SQLE-206ENST00000523430 LARP1BQ659C4 914 aaKnown RBP24.47■■□□□ 1.51
SQLE-206ENST00000523430 RAB11FIP4Q86YS3 637 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 SMARCC2Q8TAQ2 1214 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 DDX11Q96FC9 970 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 ANAPC4Q9UJX5 808 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 PTMSP20962 102 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 MFSD14BQ5SR56 506 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 LLPHQ9BRT6 129 aaKnown RBP24.47■■□□□ 1.51
SQLE-206ENST00000523430 KRT23Q9C075 422 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 SENP2Q9HC62 589 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 DCP1AQ9NPI6 582 aaPredicted RBP24.47■■□□□ 1.51
SQLE-206ENST00000523430 HPS5Q9UPZ3 1129 aa24.47■■□□□ 1.51
SQLE-206ENST00000523430 C10orf71Q711Q0 1435 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 PTPDC1A2A3K4 754 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 EVX2Q03828 476 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 GIMAP6Q6P9H5 292 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 CTR9Q6PD62 1173 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 CDC37L1Q7L3B6 337 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 COA1Q9GZY4 146 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 TOMM22Q9NS69 142 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 ZSWIM5Q9P217 1185 aa24.46■■□□□ 1.51
SQLE-206ENST00000523430 IGSF3O75054 1194 aa24.45■■□□□ 1.51
SQLE-206ENST00000523430 GSTO1P78417 241 aa24.45■■□□□ 1.51
SQLE-206ENST00000523430 TMX4Q9H1E5 349 aaPredicted RBP24.45■■□□□ 1.51
SQLE-206ENST00000523430 LMBRD1Q9NUN5 540 aa24.45■■□□□ 1.51
SQLE-206ENST00000523430 MROH7-TTC4A0A0A0MT08 1334 aa24.45■■□□□ 1.51
SQLE-206ENST00000523430 MYH2Q9UKX2 1941 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 FAM205AQ6ZU69 1335 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 PDCP20941 246 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 GSE1Q14687 1217 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 IGDCC4Q8TDY8 1250 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 TMEM87BQ96K49 555 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 ZC3H12CQ9C0D7 883 aaKnown RBP24.45■■□□□ 1.5
SQLE-206ENST00000523430 RNF41Q9H4P4 317 aaPredicted RBP24.45■■□□□ 1.5
SQLE-206ENST00000523430 LY9Q9HBG7 655 aa24.45■■□□□ 1.5
SQLE-206ENST00000523430 PPFIA3O75145 1194 aa24.44■■□□□ 1.5
SQLE-206ENST00000523430 GTF2IP78347 998 aa24.44■■□□□ 1.5
SQLE-206ENST00000523430 SH3RF3Q8TEJ3 882 aaPredicted RBP24.44■■□□□ 1.5
SQLE-206ENST00000523430 RTFDC1Q9BY42 306 aaPredicted RBP24.44■■□□□ 1.5
SQLE-206ENST00000523430 ZNF219Q9P2Y4 722 aaPredicted RBP24.44■■□□□ 1.5
SQLE-206ENST00000523430 USP17L12C9JPN9 530 aa24.43■■□□□ 1.5
SQLE-206ENST00000523430 USP17L21D6R901 530 aa24.43■■□□□ 1.5
SQLE-206ENST00000523430 DOK7Q18PE1 504 aa24.43■■□□□ 1.5
SQLE-206ENST00000523430 TMEM67Q5HYA8 995 aa24.43■■□□□ 1.5
SQLE-206ENST00000523430 ATP8A2Q9NTI2 1148 aa24.43■■□□□ 1.5
SQLE-206ENST00000523430 DLEC1Q9Y238 1755 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms