RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 USP40Q9NVE5 1235 aa12.7□□□□□ -0.38
CTNNA1-235ENST00000522730 SUGT1Q9Y2Z0 365 aa12.7□□□□□ -0.38
CTNNA1-235ENST00000522730 UNCXA6NJT0 531 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 GNAI2P04899 355 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 TRIM27P14373 513 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 PRDX5P30044 214 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 CCDC102BQ68D86 513 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 ABCF2Q9UG63 623 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 DENND2AQ9ULE3 1009 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
CTNNA1-235ENST00000522730 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.381e-11■□□□□ 9.6
CTNNA1-235ENST00000522730 CRHR2Q13324 411 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 PKN2Q16513 984 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 XAGE2Q96GT9 111 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 WRNIP1Q96S55 665 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 PTPN18Q99952 460 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 AKAP2Q9Y2D5 859 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 DAGLAQ9Y4D2 1042 aa12.68□□□□□ -0.38
CTNNA1-235ENST00000522730 CCL15-CCL14A0A0B4J2E2 113 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 A0A1B0GUL7 405 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 RGS19P49795 217 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 CCL15Q16663 113 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 DZIP1Q86YF9 867 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
CTNNA1-235ENST00000522730 SEMA3EO15041 775 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 GTF2A2P52657 109 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 NFIAQ12857 509 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 OS9Q13438 667 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 FKBP1CQ5VVH2 108 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 FAM151AQ8WW52 585 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 ZNF341Q9BYN7 854 aa12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-235ENST00000522730 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 MVPQ14764 893 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 FBXO46Q6PJ61 603 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 ZFPM1Q8IX07 1006 aa12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 ZGPATQ8N5A5 531 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 CFHR5Q9BXR6 569 aa12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
CTNNA1-235ENST00000522730 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 INPP5BP32019 993 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 SP3Q02447 781 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 MTX1Q13505 466 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 SPTY2D1Q68D10 685 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 TBC1D9Q6ZT07 1266 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 ERO1AQ96HE7 468 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 SNCAIPQ9Y6H5 919 aa12.64□□□□□ -0.39
CTNNA1-235ENST00000522730 SPDYE5A6NIY4 337 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 IRF6O14896 467 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 TNRC18O15417 2968 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 WDHD1O75717 1129 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 CETPP11597 493 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 RGS3P49796 1198 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 PICALMQ13492 652 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 EFCC1Q9HA90 598 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 RAI14Q9P0K7 980 aa12.63□□□□□ -0.39
CTNNA1-235ENST00000522730 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 BTDP43251 543 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 MECOMQ03112 1051 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 SNRKQ9NRH2 765 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
CTNNA1-235ENST00000522730 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
CTNNA1-235ENST00000522730 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
CTNNA1-235ENST00000522730 SLURP2P0DP57 97 aa12.61□□□□□ -0.39
CTNNA1-235ENST00000522730 ATP8B2P98198 1209 aa12.61□□□□□ -0.39
CTNNA1-235ENST00000522730 PPIL2Q13356 520 aa12.61□□□□□ -0.39
CTNNA1-235ENST00000522730 LRP2BPQ9P2M1 347 aa12.61□□□□□ -0.39
CTNNA1-235ENST00000522730 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms