RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	TYW5	A2RUC4	315 aa	Known RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	TRMT1	Q9NXH9	659 aa	Known RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	PTPDC1	A2A3K4	754 aa		11.65	□□□□□ -0.55
TCF7-223	ENST00000522653	IWS1	Q96ST2	819 aa		11.65	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC52A2	Q9HAB3	445 aa		11.65	□□□□□ -0.55
TCF7-223	ENST00000522653	MRPL11	Q9Y3B7	192 aa	Known RBP	11.65	□□□□□ -0.55
TCF7-223	ENST00000522653	PARD3	Q8TEW0	1356 aa		11.65	□□□□□ -0.55
TCF7-223	ENST00000522653	IGSF3	O75054	1194 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	NT5C2	P49902	561 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	RNF123	Q5XPI4	1314 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	GSTTP1	A0A1W2PQM5	241 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	GOLGA6L9	A6NEM1	432 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	RPS8	P62241	208 aa	Known RBP	11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	TTC31	Q49AM3	519 aa	Predicted RBP	11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	FNBP1	Q96RU3	617 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	ADPGK	Q9BRR6	497 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	MLXIP	Q9HAP2	919 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	CACYBP	Q9HB71	228 aa	Known RBP	11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	CHPF2	Q9P2E5	772 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	WWC3	Q9ULE0	1092 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	RABGAP1	Q9Y3P9	1069 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	SPAG1	Q07617	926 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	ARHGAP29	Q52LW3	1261 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	TMED8	Q6PL24	325 aa	Predicted RBP	11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	TBC1D9	Q6ZT07	1266 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	SEMA3E	O15041	775 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	PRPF40B	Q6NWY9	871 aa	Known RBP	11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	ZBTB8OS	Q8IWT0	167 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	RAB3IL1	Q8TBN0	382 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	ZBED2	Q9BTP6	218 aa		11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	NAA15	Q9BXJ9	866 aa	Known RBP	11.64	□□□□□ -0.55
TCF7-223	ENST00000522653	RNF113A	O15541	343 aa	Known RBP	11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	YARS	P54577	528 aa	Known RBP	11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	PDE4D	Q08499	809 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	TRPC3	Q13507	836 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	CFAP58	Q5T655	872 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	MCMDC2	Q4G0Z9	681 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	ZNF449	Q6P9G9	518 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC16A10	Q8TF71	515 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	LPIN2	Q92539	896 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	FAM83G	A6ND36	823 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653		F8W8V4	182 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	NDC80	O14777	642 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	DAAM2	Q86T65	1068 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	GSDMB	Q8TAX9	411 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	EXOC6B	Q9Y2D4	811 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	TTC41P	Q6P2S7	1318 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	GNAT1	P11488	350 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	DMTN	Q08495	405 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	CFAP100	Q494V2	611 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	MFSD14C	Q5VZR4	134 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	MIS12	Q9H081	205 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC8A2	Q9UPR5	921 aa		11.63	□□□□□ -0.55
TCF7-223	ENST00000522653	KIF5C	O60282	957 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	TFDP1	Q14186	410 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	KIFAP3	Q92845	792 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	NEK1	Q96PY6	1258 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	PAGR1	Q9BTK6	254 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	IKBKG	Q9Y6K9	419 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ATP8B3	O60423	1300 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	DISP1	Q96F81	1524 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ARID4A	P29374	1257 aa	Predicted RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC39A6	Q13433	755 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	MSL1	Q68DK7	614 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ZNF790	Q6PG37	636 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC17A8	Q8NDX2	589 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	TTC16	Q8NEE8	873 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	RNF34	Q969K3	372 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	NRBP2	Q9NSY0	501 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	PRKG1	Q13976	671 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ZNF526	Q8TF50	670 aa	Predicted RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	SRRT	Q9BXP5	876 aa	Known RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ARFGAP3	Q9NP61	516 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	STK10	O94804	968 aa	Known RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	HDAC1	Q13547	482 aa	Predicted RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC26A6	Q9BXS9	759 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	XDH	P47989	1333 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ADGRL2	O95490	1459 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	KIF28P	B7ZC32	967 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ZNF500	O60304	480 aa	Predicted RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	SLC1A4	P43007	532 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	EIF4A2	Q14240	407 aa	Known RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	NBPF11	Q86T75	865 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	OTUD6B	Q8N6M0	293 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	CPLX3	Q8WVH0	158 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	LMBR1	Q8WVP7	490 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	GTF3C6	Q969F1	213 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	CCDC17	Q96LX7	622 aa		11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	RIOK1	Q9BRS2	568 aa	Known RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653		V9GYY5	206 aa	Predicted RBP	11.62	□□□□□ -0.55
TCF7-223	ENST00000522653	ERFE	Q4G0M1	354 aa		11.61	□□□□□ -0.55
TCF7-223	ENST00000522653	CNNM3	Q8NE01	707 aa		11.61	□□□□□ -0.55
TCF7-223	ENST00000522653	DYDC1	Q8WWB3	177 aa		11.61	□□□□□ -0.55
TCF7-223	ENST00000522653	MASTL	Q96GX5	879 aa		11.61	□□□□□ -0.55
TCF7-223	ENST00000522653	PAG1	Q9NWQ8	432 aa		11.61	□□□□□ -0.55
TCF7-223	ENST00000522653	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.61	□□□□□ -0.55
TCF7-223	ENST00000522653	ABCA8	O94911	1581 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms