RNA–Protein interactions for RNA: ENST00000522416.1

AP003550.1-201, humanhuman

TSL 3 BASIC

Gene AP003550.1, Length 414 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003550.1-201ENST00000522416 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
AP003550.1-201ENST00000522416 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
AP003550.1-201ENST00000522416 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
AP003550.1-201ENST00000522416 PPP2R3BQ9Y5P8 575 aa12.96□□□□□ -0.33
AP003550.1-201ENST00000522416 DOCK2Q92608 1830 aa12.96□□□□□ -0.33
AP003550.1-201ENST00000522416 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 TNNI2P48788 182 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 MECOMQ03112 1051 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 LDLRAD1Q5T700 205 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 AACSQ86V21 672 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 ZFPM1Q8IX07 1006 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
AP003550.1-201ENST00000522416 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 TRPA1O75762 1119 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 CAPN15O75808 1086 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 UQCRFS1P1P0C7P4 283 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 CCDC158Q5M9N0 1113 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 TNS4Q8IZW8 715 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 ELP3Q9H9T3 547 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
AP003550.1-201ENST00000522416 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 BTDP43251 543 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 ZAP70P43403 619 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 PICALMQ13492 652 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 SPTY2D1Q68D10 685 aaPredicted RBP12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 PIH1D3Q9NQM4 214 aaKnown RBP12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 RNF186Q9NXI6 227 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 LRP2BPQ9P2M1 347 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
AP003550.1-201ENST00000522416 MROH7-TTC4A0A0A0MT08 1334 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 HMMRO75330 724 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 GJA5P36382 358 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 RGS3P49796 1198 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 ERC1Q8IUD2 1116 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 WNK4Q96J92 1243 aa12.92□□□□□ -0.34
AP003550.1-201ENST00000522416 GAKO14976 1311 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 FOCADQ5VW36 1801 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 VGLL4Q14135 290 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 MAP3K11Q16584 847 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 FAM83AQ86UY5 434 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 FAM151AQ8WW52 585 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 ZKSCAN4Q969J2 545 aaPredicted RBP12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 DDX4Q9NQI0 724 aaKnown RBP12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 LAMB1P07942 1786 aa12.91□□□□□ -0.34
AP003550.1-201ENST00000522416 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 FKBP1CQ5VVH2 108 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 ZSCAN29Q8IWY8 852 aaPredicted RBP12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 ANKRD13AQ8IZ07 590 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 WRNIP1Q96S55 665 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
AP003550.1-201ENST00000522416 MYH1P12882 1939 aa12.9□□□□□ -0.35
AP003550.1-201ENST00000522416 MYH7P12883 1935 aa12.9□□□□□ -0.35
AP003550.1-201ENST00000522416 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 WDHD1O75717 1129 aaPredicted RBP12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 INPP5BP32019 993 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 MAP3K9P80192 1104 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 ATAD5Q96QE3 1844 aa12.89□□□□□ -0.35
AP003550.1-201ENST00000522416 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 FAM196BA6NMK8 535 aa12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 ZBTB22O15209 634 aa12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 CA12O43570 354 aa12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 RHBDL3P58872 404 aa12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 GSTO1P78417 241 aa12.88□□□□□ -0.35
AP003550.1-201ENST00000522416 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms