RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 GOLM1Q8NBJ4 401 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 GRIN3AQ8TCU5 1115 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 PUS7Q96PZ0 661 aaKnown RBP5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 HIRIP3Q9BW71 556 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 PRDM6Q9NQX0 595 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 FRRS1LQ9P0K9 344 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 TRIM33Q9UPN9 1127 aa5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 SUPT16HQ9Y5B9 1047 aaKnown RBP5.32□□□□□ -1.56
HMGN1P28-201ENST00000521340 TLDC2A0PJX2 215 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 SOX1O00570 391 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 NID1P14543 1247 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 ADH7P40394 386 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 PCDH1Q08174 1060 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 PCSK7Q16549 785 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 RSPO4Q2I0M5 234 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 NBPF6Q5VWK0 638 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 CEP135Q66GS9 1140 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 GATAD2BQ8WXI9 593 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 SPACA7Q96KW9 195 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 NBPF4Q96M43 638 aa5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 SH2B1Q9NRF2 756 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P28-201ENST00000521340 CPB1P15086 417 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 NME2P22392 152 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 ARNTP27540 789 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 ZNF157P51786 506 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 NKAPLQ5M9Q1 402 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 SOGA3Q5TF21 947 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 ZNF662Q6ZS27 426 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 FAM35AQ86V20 835 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 ASAP3Q8TDY4 903 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 MKL1Q969V6 931 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 OSBPL2Q9H1P3 480 aa5.3□□□□□ -1.56
HMGN1P28-201ENST00000521340 STK10O94804 968 aaKnown RBP5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 EPHA1P21709 976 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 GIPRP48546 466 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 GRIK4Q16099 956 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 PRRT3Q5FWE3 981 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 SCARA3Q6AZY7 606 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 JAZF1Q86VZ6 243 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 PMFBP1Q8TBY8 1022 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 NKD1Q969G9 470 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 UBE2OQ9C0C9 1292 aaKnown RBP5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 SMG9Q9H0W8 520 aaKnown RBP5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 TPSG1Q9NRR2 321 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 STRIP2Q9ULQ0 834 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 CYP8B1Q9UNU6 501 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 POLR3KQ9Y2Y1 108 aaPredicted RBP5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 MSRB2Q9Y3D2 182 aa5.29□□□□□ -1.56
HMGN1P28-201ENST00000521340 SPDYE3A6NKU9 549 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 GFRA2O00451 464 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 SMNDC1O75940 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 GHRHP01286 108 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 EIF2AK2P19525 551 aaKnown RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 CDK8P49336 464 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 APOBRQ0VD83 1088 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 TRIM28Q13263 835 aaKnown RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 NEUROD1Q13562 356 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 RAB33AQ14088 237 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 FOXD4L6Q3SYB3 417 aaPredicted RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 EGFLAMQ63HQ2 1017 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 FOXD4L3Q6VB84 417 aaPredicted RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 REXO1Q8N1G1 1221 aaKnown RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 RBBP8NLQ8NC74 664 aaPredicted RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 IGFLR1Q9H665 355 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 SOX17Q9H6I2 414 aaPredicted RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 ZSWIM4Q9H7M6 989 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 EHMT1Q9H9B1 1298 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 PRKAG3Q9UGI9 489 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 PPT2Q9UMR5 302 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 CDK11AQ9UQ88 783 aaPredicted RBP5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 MRVI1Q9Y6F6 885 aa5.28□□□□□ -1.56
HMGN1P28-201ENST00000521340 PRR36Q9H6K5 1346 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 ATE1O95260 518 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 APBA3O96018 575 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 CTSBP07858 339 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 PTPRAP18433 802 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 CLCQ05315 142 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 SEPT6Q14141 434 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 MPP2Q14168 576 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 RASA3Q14644 834 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 SEZ6Q53EL9 994 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 SNAP47Q5SQN1 464 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 PSAPL1Q6NUJ1 521 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 ANKS3Q6ZW76 656 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 REC114Q7Z4M0 266 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 SULF2Q8IWU5 870 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 SRRTQ9BXP5 876 aaKnown RBP5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 GPN3Q9UHW5 284 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P28-201ENST00000521340 FAM221BA6H8Z2 402 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 TLR3O15455 904 aaKnown RBP5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 ECEL1O95672 775 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 CANXP27824 592 aaKnown RBP5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 CDC27P30260 824 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 PPP2R3AQ06190 1150 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 TRAPPC3LQ5T215 181 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 CELF2-AS1Q8N7Q2 184 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 LACRTQ9GZZ8 138 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms