RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 MBD4O95243 580 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 HSPA6P17066 643 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 HTRA3P83110 453 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 DCAF8Q5TAQ9 597 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
VAPB-206ENST00000520497 LCORLQ8N3X6 602 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 AIDAQ96BJ3 306 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 KCNQ5Q9NR82 932 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 POLR2AP24928 1970 aaKnown RBP10.19□□□□□ -0.78
VAPB-206ENST00000520497 RPAP1Q9BWH6 1393 aaPredicted RBP10.19□□□□□ -0.78
VAPB-206ENST00000520497 MROH7-TTC4A0A0A0MT08 1334 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 GAKO14976 1311 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 MAGEB6P1A0A0J9YX57 407 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 GSTO1P78417 241 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 CREB3L3Q68CJ9 461 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 LARGE2Q8N3Y3 721 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 MIGA1Q8NAN2 632 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 FAM163AQ96GL9 167 aaPredicted RBP10.19□□□□□ -0.78
VAPB-206ENST00000520497 ARMT1Q9H993 441 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 RNF181Q9P0P0 153 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
VAPB-206ENST00000520497 GSG1L2A8MUP6 293 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 SLC27A2O14975 620 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 LDHCP07864 332 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 GNAT2P19087 354 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 DIXDC1Q155Q3 683 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 ALX1Q15699 326 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 HSCBQ8IWL3 235 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 REM2Q8IYK8 340 aaPredicted RBP10.18□□□□□ -0.78
VAPB-206ENST00000520497 MXD3Q9BW11 206 aa10.18□□□□□ -0.78
VAPB-206ENST00000520497 EPB41L4AQ9HCS5 686 aaPredicted RBP10.18□□□□□ -0.78
VAPB-206ENST00000520497 CEP350Q5VT06 3117 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 GPR75-ASB3A0A0A6YYF3 556 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 PATL2C9JE40 543 aaKnown RBP10.17□□□□□ -0.78
VAPB-206ENST00000520497 HAX1O00165 279 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 FGAP02671 866 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 CYP21A2P08686 494 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 VIL1P09327 827 aaKnown RBP10.17□□□□□ -0.78
VAPB-206ENST00000520497 PPP4CP60510 307 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 DYNLL1P63167 89 aaKnown RBP10.17□□□□□ -0.78
VAPB-206ENST00000520497 RABEP1Q15276 862 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 CERS3Q8IU89 383 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 NIM1KQ8IY84 436 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 FBXW7Q969H0 707 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 MRIQ9BWK5 157 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 RRAGCQ9HB90 399 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 AATFQ9NY61 560 aaKnown RBP eCLIP10.17□□□□□ -0.78
VAPB-206ENST00000520497 ZNRF3Q9ULT6 936 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 TAF6LQ9Y6J9 622 aa10.17□□□□□ -0.78
VAPB-206ENST00000520497 MYO3BQ8WXR4 1341 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 MYH6P13533 1939 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 PSMD14O00487 310 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 PRKAB2O43741 272 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 ZKSCAN1P17029 563 aaPredicted RBP10.16□□□□□ -0.78
VAPB-206ENST00000520497 HDLBPQ00341 1268 aaKnown RBP10.16□□□□□ -0.78
VAPB-206ENST00000520497 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 HHIPL2Q6UWX4 724 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 IFNL3Q8IZI9 196 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 GMLQ99445 158 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 TM6SF1Q9BZW5 370 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
VAPB-206ENST00000520497 CTNNA3Q9UI47 895 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 TTF2Q9UNY4 1162 aaKnown RBP10.16□□□□□ -0.78
VAPB-206ENST00000520497 DAGLAQ9Y4D2 1042 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 SLC4A4Q9Y6R1 1079 aa10.16□□□□□ -0.78
VAPB-206ENST00000520497 GREB1LQ9C091 1923 aaPredicted RBP10.15□□□□□ -0.78
VAPB-206ENST00000520497 FZD9O00144 591 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 BAG3O95817 575 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 BTDP43251 543 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 RHBDL3P58872 404 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 ADCK5Q3MIX3 580 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 RSBN1LQ6PCB5 846 aaPredicted RBP10.15□□□□□ -0.78
VAPB-206ENST00000520497 SDR42E1Q8WUS8 393 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 JDP2Q8WYK2 163 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 SNX21Q969T3 373 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 CRNKL1Q9BZJ0 848 aaKnown RBP10.15□□□□□ -0.78
VAPB-206ENST00000520497 NBPF3Q9H094 633 aa10.15□□□□□ -0.78
VAPB-206ENST00000520497 MYH4Q9Y623 1939 aa10.15□□□□□ -0.79
VAPB-206ENST00000520497 F8W031 263 aaPredicted RBP10.14□□□□□ -0.79
VAPB-206ENST00000520497 ST18O60284 1047 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 RAD17O75943 681 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 TOMM70O94826 608 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 CD2BP2O95400 341 aaKnown RBP10.14□□□□□ -0.79
VAPB-206ENST00000520497 PLCG2P16885 1265 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 CRKP46108 304 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 SCNN1DP51172 638 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 CXCL9Q07325 125 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 KRT32Q14532 448 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 IMMTQ16891 758 aaKnown RBP10.14□□□□□ -0.79
VAPB-206ENST00000520497 CIAPIN1Q6FI81 312 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 STOX1Q6ZVD7 989 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms