RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 YIPF2Q9BWQ6 316 aa7.11□□□□□ -1.27
SQLE-204ENST00000520493 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 MAOBP27338 520 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 RXRBP28702 533 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 USP11P51784 963 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 RPS26P11Q5JNZ5 115 aaPredicted RBP7.1□□□□□ -1.27
SQLE-204ENST00000520493 GIMAP7Q8NHV1 300 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 MFSD14AQ96MC6 490 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 FBXL18Q96ME1 805 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 ABCB6Q9NP58 842 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 RAD18Q9NS91 495 aa7.1□□□□□ -1.27
SQLE-204ENST00000520493 PNMA6FA0A0J9YX94 578 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 TREHO43280 583 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 AP3B2Q13367 1082 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 GRM2Q14416 872 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 COL19A1Q14993 1142 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 PKN1Q16512 942 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 EPS8L3Q8TE67 593 aaKnown RBP7.09□□□□□ -1.27
SQLE-204ENST00000520493 LEMD3Q9Y2U8 911 aa7.09□□□□□ -1.27
SQLE-204ENST00000520493 TIAF1O95411 115 aa7.08□□□□□ -1.28
SQLE-204ENST00000520493 XRCC5P13010 732 aaKnown RBP7.08□□□□□ -1.28
SQLE-204ENST00000520493 MAP4P27816 1152 aaKnown RBP7.08□□□□□ -1.28
SQLE-204ENST00000520493 AEBP1Q8IUX7 1158 aa7.08□□□□□ -1.28
SQLE-204ENST00000520493 NRSN2Q9GZP1 204 aa7.08□□□□□ -1.28
SQLE-204ENST00000520493 DLGAP3O95886 979 aa7.07□□□□□ -1.28
SQLE-204ENST00000520493 RANGAP1P46060 587 aaPredicted RBP7.07□□□□□ -1.28
SQLE-204ENST00000520493 FCGRTP55899 365 aa7.07□□□□□ -1.28
SQLE-204ENST00000520493 PPP2R3AQ06190 1150 aa7.07□□□□□ -1.28
SQLE-204ENST00000520493 SOX4Q06945 474 aaPredicted RBP7.07□□□□□ -1.28
SQLE-204ENST00000520493 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
SQLE-204ENST00000520493 ENOX2Q16206 610 aaKnown RBP7.07□□□□□ -1.28
SQLE-204ENST00000520493 NFXL1Q6ZNB6 911 aa7.07□□□□□ -1.28
SQLE-204ENST00000520493 ATG3Q9NT62 314 aa7.07□□□□□ -1.28
SQLE-204ENST00000520493 ADH5P11766 374 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 MAPK8P45983 427 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 ATP2B2Q01814 1243 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 DSC3Q14574 896 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 MSMPQ1L6U9 139 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 PAOXQ6QHF9 649 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 VSIG10LQ86VR7 867 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 FBF1Q8TES7 1133 aa7.06□□□□□ -1.28
SQLE-204ENST00000520493 GPN3Q9UHW5 284 aaPredicted RBP7.06□□□□□ -1.28
SQLE-204ENST00000520493 FAM95CA0A1B0GW59 222 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 PRRG2O14669 202 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 DRD2P14416 443 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.05□□□□□ -1.28
SQLE-204ENST00000520493 AKAP4Q5JQC9 854 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 FBXL6Q8N531 539 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 ASB16Q96NS5 453 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 TRIM56Q9BRZ2 755 aaKnown RBP7.05□□□□□ -1.28
SQLE-204ENST00000520493 BCO2Q9BYV7 579 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
SQLE-204ENST00000520493 NCANO14594 1321 aa7.04□□□□□ -1.28
SQLE-204ENST00000520493 FARP2O94887 1054 aaPredicted RBP7.04□□□□□ -1.28
SQLE-204ENST00000520493 NFKBIBQ15653 356 aa7.04□□□□□ -1.28
SQLE-204ENST00000520493 ALG1LQ6GMV1 187 aa7.04□□□□□ -1.28
SQLE-204ENST00000520493 LILRA6Q6PI73 481 aa7.04□□□□□ -1.28
SQLE-204ENST00000520493 C2CD4AQ8NCU7 369 aaPredicted RBP7.04□□□□□ -1.28
SQLE-204ENST00000520493 GLIS3Q8NEA6 775 aa7.04□□□□□ -1.28
SQLE-204ENST00000520493 PAPLNO95428 1278 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 PRNPP04156 253 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 FOSL1P15407 271 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
SQLE-204ENST00000520493 MAP7Q14244 749 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 PI16Q6UXB8 463 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 DYMQ7RTS9 669 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 KSR1Q8IVT5 923 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 FLCNQ8NFG4 579 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 TMEM39AQ9NV64 488 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 AKAP2Q9Y2D5 859 aa7.03□□□□□ -1.28
SQLE-204ENST00000520493 B8ZZF3 427 aa7.02□□□□□ -1.29
SQLE-204ENST00000520493 SLFN14P0C7P3 912 aa7.02□□□□□ -1.29
SQLE-204ENST00000520493 RAB6AP20340 208 aa7.02□□□□□ -1.29
SQLE-204ENST00000520493 GSTT1P30711 240 aa7.02□□□□□ -1.29
SQLE-204ENST00000520493 FMR1Q06787 632 aaKnown RBP eCLIP7.02□□□□□ -1.29
SQLE-204ENST00000520493 CPSF6Q16630 551 aaKnown RBP eCLIP7.02□□□□□ -1.29
SQLE-204ENST00000520493 NXPE4Q6UWF7 544 aa7.02□□□□□ -1.29
SQLE-204ENST00000520493 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
SQLE-204ENST00000520493 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.01□□□□□ -1.29
SQLE-204ENST00000520493 GIPC1O14908 333 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 AOC2O75106 756 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 ECEL1O95672 775 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 F13BP05160 661 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 CTSBP07858 339 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 ASPAP45381 313 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 FAAP100Q0VG06 881 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 METTL22Q9BUU2 404 aaPredicted RBP7.01□□□□□ -1.29
SQLE-204ENST00000520493 SPG7Q9UQ90 795 aa7.01□□□□□ -1.29
SQLE-204ENST00000520493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
SQLE-204ENST00000520493 GSTP1P09211 210 aaKnown RBP7□□□□□ -1.29
SQLE-204ENST00000520493 BUD31P41223 144 aaPredicted RBP7□□□□□ -1.29
SQLE-204ENST00000520493 TMCO4Q5TGY1 634 aa7□□□□□ -1.29
SQLE-204ENST00000520493 AGBL5Q8NDL9 886 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms