RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 BSDC1Q9NW68 430 aaPredicted RBP30.03■■■□□ 2.4
COL13A1-213ENST00000520267 GNAT2P19087 354 aa30.03■■■□□ 2.4
COL13A1-213ENST00000520267 TMEM67Q5HYA8 995 aa30.03■■■□□ 2.4
COL13A1-213ENST00000520267 ME1P48163 572 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 AKNAD1Q5T1N1 836 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 SASS6Q6UVJ0 657 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 LUZP1Q86V48 1076 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 MICU3Q86XE3 530 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 KIF28PB7ZC32 967 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 TDO2P48775 406 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 SNW1Q13573 536 aaKnown RBP30.02■■■□□ 2.4
COL13A1-213ENST00000520267 CCDC144CPQ8IYA2 1237 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 AIFM3Q96NN9 605 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 CBX8Q9HC52 389 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 MINPP1Q9UNW1 487 aa30.02■■■□□ 2.4
COL13A1-213ENST00000520267 GTF2E1P29083 439 aaPredicted RBP30.01■■■□□ 2.39
COL13A1-213ENST00000520267 ECM29Q5VYK3 1845 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 NFXL1Q6ZNB6 911 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 ADGRA1Q86SQ6 560 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 SGMS1Q86VZ5 419 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 CELF1Q92879 486 aaKnown RBP30.01■■■□□ 2.39
COL13A1-213ENST00000520267 CLIC4Q9Y696 253 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 COL1A1P02452 1464 aaPredicted RBP30.01■■■□□ 2.39
COL13A1-213ENST00000520267 ZBTB43O43298 467 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 OFD1O75665 1012 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 UBE4AQ14139 1066 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 ENGASEQ8NFI3 743 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 MYL10Q9BUA6 226 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 NACAP1Q9BZK3 213 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 ABCF2Q9UG63 623 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 SRP68Q9UHB9 627 aaKnown RBP30.01■■■□□ 2.39
COL13A1-213ENST00000520267 PCDHA7Q9UN72 937 aa30.01■■■□□ 2.39
COL13A1-213ENST00000520267 CYP7A1P22680 504 aa30■■■□□ 2.39
COL13A1-213ENST00000520267 SLC10A5Q5PT55 438 aa30■■■□□ 2.39
COL13A1-213ENST00000520267 CCDC73Q6ZRK6 1079 aa30■■■□□ 2.39
COL13A1-213ENST00000520267 CNNM2Q9H8M5 875 aa30■■■□□ 2.39
COL13A1-213ENST00000520267 BTAF1O14981 1849 aa30■■■□□ 2.39
COL13A1-213ENST00000520267 IFIT3O14879 490 aaKnown RBP29.99■■■□□ 2.39
COL13A1-213ENST00000520267 KIF23Q02241 960 aaPredicted RBP29.99■■■□□ 2.39
COL13A1-213ENST00000520267 MYSM1Q5VVJ2 828 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 MFSD6Q6ZSS7 791 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 BRAPQ7Z569 592 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 LINC00301Q8NCQ3 95 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 LIFRP42702 1097 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 PHKBQ93100 1093 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 ZNF830Q96NB3 372 aaPredicted RBP29.99■■■□□ 2.39
COL13A1-213ENST00000520267 ALG1Q9BT22 464 aa29.99■■■□□ 2.39
COL13A1-213ENST00000520267 FAM217BQ9NTX9 383 aaPredicted RBP29.99■■■□□ 2.39
COL13A1-213ENST00000520267 CDKL5O76039 1030 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 FSIP1Q8NA03 581 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 STAG1Q8WVM7 1258 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 KRT23Q9C075 422 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 NARFQ9UHQ1 456 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 GOLGA8AA7E2F4 631 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 NTRK3Q16288 839 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 GNL3LQ9NVN8 582 aaKnown RBP29.98■■■□□ 2.39
COL13A1-213ENST00000520267 RAI14Q9P0K7 980 aa29.98■■■□□ 2.39
COL13A1-213ENST00000520267 RPS6KA4O75676 772 aa29.97■■■□□ 2.39
COL13A1-213ENST00000520267 FAM160A1Q05DH4 1040 aa29.97■■■□□ 2.39
COL13A1-213ENST00000520267 RC3H1Q5TC82 1133 aaKnown RBP29.97■■■□□ 2.39
COL13A1-213ENST00000520267 DNAJC25Q9H1X3 360 aa29.97■■■□□ 2.39
COL13A1-213ENST00000520267 RGL2O15211 777 aa29.97■■■□□ 2.39
COL13A1-213ENST00000520267 RRP12Q5JTH9 1297 aaKnown RBP29.97■■■□□ 2.39
COL13A1-213ENST00000520267 STK11IPQ8N1F8 1099 aa29.97■■■□□ 2.39
COL13A1-213ENST00000520267 POLR3EQ9NVU0 708 aa29.97■■■□□ 2.39
COL13A1-213ENST00000520267 STK38Q15208 465 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 CPLX2Q6PUV4 134 aaKnown RBP29.96■■■□□ 2.39
COL13A1-213ENST00000520267 CACNA1SQ13698 1873 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 UBAP1LF5GYI3 381 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 CTAGE5O15320 804 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 RANBP6O60518 1105 aaKnown RBP29.96■■■□□ 2.39
COL13A1-213ENST00000520267 ADALQ6DHV7 355 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 RGS22Q8NE09 1264 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 SLC12A7Q9Y666 1083 aa29.96■■■□□ 2.39
COL13A1-213ENST00000520267 YEATS4O95619 227 aa29.95■■■□□ 2.39
COL13A1-213ENST00000520267 CAVIN4Q5BKX8 364 aa29.95■■■□□ 2.39
COL13A1-213ENST00000520267 FAM182BQ5T319 152 aa29.95■■■□□ 2.39
COL13A1-213ENST00000520267 FNBP4Q8N3X1 1017 aaPredicted RBP29.95■■■□□ 2.39
COL13A1-213ENST00000520267 SDR42E1Q8WUS8 393 aa29.95■■■□□ 2.39
COL13A1-213ENST00000520267 FAM84BQ96KN1 310 aaPredicted RBP29.95■■■□□ 2.39
COL13A1-213ENST00000520267 ZKSCAN3Q9BRR0 538 aa29.95■■■□□ 2.39
COL13A1-213ENST00000520267 TOMM22Q9NS69 142 aa29.95■■■□□ 2.39
COL13A1-213ENST00000520267 CCDC69A6NI79 296 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 KRT40Q6A162 431 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 SETDB2Q96T68 719 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 MAGEB6P1A0A0J9YX57 407 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 GNPATO15228 680 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 KINO60870 393 aaKnown RBP29.94■■■□□ 2.38
COL13A1-213ENST00000520267 IARSP41252 1262 aaKnown RBP29.94■■■□□ 2.38
COL13A1-213ENST00000520267 ZNF165P49910 485 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.94■■■□□ 2.38
COL13A1-213ENST00000520267 MRPS27Q92552 414 aaKnown RBP29.94■■■□□ 2.38
COL13A1-213ENST00000520267 TTC12Q9H892 705 aaPredicted RBP29.94■■■□□ 2.38
COL13A1-213ENST00000520267 COL24A1Q17RW2 1714 aa29.94■■■□□ 2.38
COL13A1-213ENST00000520267 SF3A1Q15459 793 aaKnown RBP29.93■■■□□ 2.38
COL13A1-213ENST00000520267 VPS37DQ86XT2 251 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 CCDC24Q8N4L8 307 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 KCNG4Q8TDN1 519 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 NYXQ9GZU5 481 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 TAOK2Q9UL54 1235 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms