RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 A0A1W2PPZ6 126 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 SORBS3O60504 671 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 PAPLNO95428 1278 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 GRIA4P48058 902 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 NXPE4Q6UWF7 544 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 NFXL1Q6ZNB6 911 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 WNT8BQ93098 351 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 FAM46AQ96IP4 442 aaKnown RBP5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 OSBPL7Q9BZF2 842 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 JAG2Q9Y219 1238 aa5.61□□□□□ -1.51
HMGB1P41-201ENST00000520234 H3BRJ5 948 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 SPRED3Q2MJR0 410 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 DTHD1Q6ZMT9 781 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 KSR1Q8IVT5 923 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 AGBL5Q8NDL9 886 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 ANKRD24Q8TF21 1146 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 CLEC4MQ9H2X3 399 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 PPM1HQ9ULR3 514 aa5.6□□□□□ -1.51
HMGB1P41-201ENST00000520234 METTL12A8MUP2 240 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 WDR64B1ANS9 1081 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 EPHA1P21709 976 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 FCGRTP55899 365 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 PIP4K2BP78356 416 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 SETDB1Q15047 1291 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 VN1R5Q7Z5H4 357 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 FAM20CQ8IXL6 584 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 GIMAP7Q8NHV1 300 aa5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 DDX54Q8TDD1 881 aaKnown RBP5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 SOX17Q9H6I2 414 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P41-201ENST00000520234 USP17L7P0C7H9 530 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 FOSL1P15407 271 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 VAMP1P23763 118 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 ARL4DP49703 201 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 PCDH1Q08174 1060 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 IKBKEQ14164 716 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 CPSF6Q16630 551 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 ADAMTSL4Q6UY14 1074 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 KLHL23Q8NBE8 558 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 SLC38A3Q99624 504 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 ZNF576Q9H609 170 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 OSGEPQ9NPF4 335 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 RNF19AQ9NV58 838 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 VTI1BQ9UEU0 232 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 LEMD3Q9Y2U8 911 aa5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P41-201ENST00000520234 LINC01387J3KSC0 135 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 BIN1O00499 593 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 FSCN2O14926 492 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 B3GALT4O96024 378 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 ESRRAP11474 423 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 C19orf57Q0VDD7 668 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 MRPL58Q14197 206 aaKnown RBP5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 CRELD1Q96HD1 420 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 FAM161BQ96MY7 647 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 CEP44Q9C0F1 390 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 SEC31BQ9NQW1 1179 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 RAPGEFL1Q9UHV5 662 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 AKAP2Q9Y2D5 859 aa5.57□□□□□ -1.52
HMGB1P41-201ENST00000520234 ST13P50502 369 aaKnown RBP5.56□□□□□ -1.52
HMGB1P41-201ENST00000520234 PPP2R3AQ06190 1150 aa5.56□□□□□ -1.52
HMGB1P41-201ENST00000520234 BHLHE22Q8NFJ8 381 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P41-201ENST00000520234 ATG3Q9NT62 314 aa5.56□□□□□ -1.52
HMGB1P41-201ENST00000520234 SOX1O00570 391 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 CDC25BP30305 580 aa5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 TAF1CQ15572 869 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 ZNF423Q2M1K9 1284 aa5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 BEND4Q6ZU67 534 aa5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 ACAD11Q709F0 780 aa5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 MRRFQ96E11 262 aaKnown RBP5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
HMGB1P41-201ENST00000520234 WISP1O95388 367 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 CTSHP09668 335 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 CD68P34810 354 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 AP3B2Q13367 1082 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 TXNDC11Q6PKC3 985 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 SV2BQ7L1I2 683 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 SLC7A3Q8WY07 619 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 TOX2Q96NM4 488 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 NECAB3Q96P71 396 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 KCNF1Q9H3M0 494 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 BSDC1Q9NW68 430 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 TTF2Q9UNY4 1162 aaKnown RBP5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 HIF3AQ9Y2N7 669 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 CARMIL2Q6F5E8 1435 aa5.54□□□□□ -1.52
HMGB1P41-201ENST00000520234 UNCXA6NJT0 531 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 TM4SF5O14894 197 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 CYP11A1P05108 521 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 RLBP1P12271 317 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 RBM25P49756 843 aaKnown RBP5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 FAAP100Q0VG06 881 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 FLCNQ8NFG4 579 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 KLHDC7BQ96G42 594 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 MFSD14AQ96MC6 490 aa5.53□□□□□ -1.52
HMGB1P41-201ENST00000520234 NOC4LQ9BVI4 516 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms