RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 ARHGAP27Q6ZUM4 889 aa8.47□□□□□ -1.05
AP3B1-206ENST00000520122 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
AP3B1-206ENST00000520122 EHD4Q9H223 541 aa8.47□□□□□ -1.05
AP3B1-206ENST00000520122 NEFLP07196 543 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 FAM87AP0C7U9 286 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 AP3B2Q13367 1082 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 ATG4DQ86TL0 474 aaPredicted RBP8.46□□□□□ -1.06
AP3B1-206ENST00000520122 KSR1Q8IVT5 923 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 PLD6Q8N2A8 252 aaKnown RBP8.46□□□□□ -1.06
AP3B1-206ENST00000520122 FAM168AQ92567 244 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 WDR18Q9BV38 432 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 ANO2Q9NQ90 1003 aa8.46□□□□□ -1.06
AP3B1-206ENST00000520122 DBX1A6NMT0 343 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 FUT4P22083 530 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
AP3B1-206ENST00000520122 CDK5R2Q13319 367 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 FAM181AQ8N9Y4 354 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 PI4K2BQ8TCG2 481 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 SLC38A3Q99624 504 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 ZNF576Q9H609 170 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 PPP1R9AQ9ULJ8 1098 aa8.45□□□□□ -1.06
AP3B1-206ENST00000520122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
AP3B1-206ENST00000520122 SLFN14P0C7P3 912 aa8.44□□□□□ -1.06
AP3B1-206ENST00000520122 CD8BP10966 210 aa8.44□□□□□ -1.06
AP3B1-206ENST00000520122 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
AP3B1-206ENST00000520122 LIG1P18858 919 aa8.43□□□□□ -1.06
AP3B1-206ENST00000520122 ZNF211Q13398 564 aaPredicted RBP8.43□□□□□ -1.06
AP3B1-206ENST00000520122 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
AP3B1-206ENST00000520122 VAV3Q9UKW4 847 aa8.43□□□□□ -1.06
AP3B1-206ENST00000520122 SYNGAP1Q96PV0 1343 aa8.43□□□□□ -1.06
AP3B1-206ENST00000520122 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
AP3B1-206ENST00000520122 RNGTTO60942 597 aaKnown RBP8.42□□□□□ -1.06
AP3B1-206ENST00000520122 RNASE1P07998 156 aaKnown RBP8.42□□□□□ -1.06
AP3B1-206ENST00000520122 KIAA0319Q5VV43 1072 aa8.42□□□□□ -1.06
AP3B1-206ENST00000520122 WFDC3Q8IUB2 231 aa8.42□□□□□ -1.06
AP3B1-206ENST00000520122 BRPF3Q9ULD4 1205 aa8.42□□□□□ -1.06
AP3B1-206ENST00000520122 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
AP3B1-206ENST00000520122 ID3Q02535 119 aa8.41□□□□□ -1.06
AP3B1-206ENST00000520122 PRKCQQ04759 706 aa8.41□□□□□ -1.06
AP3B1-206ENST00000520122 IFI16Q16666 785 aaKnown RBP8.41□□□□□ -1.06
AP3B1-206ENST00000520122 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
AP3B1-206ENST00000520122 SMYD4Q8IYR2 804 aaPredicted RBP8.41□□□□□ -1.06
AP3B1-206ENST00000520122 GLIS3Q8NEA6 775 aa8.41□□□□□ -1.06
AP3B1-206ENST00000520122 TMEM40Q8WWA1 233 aa8.41□□□□□ -1.06
AP3B1-206ENST00000520122 ZC3H12CQ9C0D7 883 aaKnown RBP8.41□□□□□ -1.06
AP3B1-206ENST00000520122 ITPKAP23677 461 aa8.4□□□□□ -1.06
AP3B1-206ENST00000520122 AOC3Q16853 763 aa8.4□□□□□ -1.06
AP3B1-206ENST00000520122 HRASLS5Q96KN8 279 aa8.4□□□□□ -1.06
AP3B1-206ENST00000520122 MBNL3Q9NUK0 354 aaKnown RBP8.4□□□□□ -1.06
AP3B1-206ENST00000520122 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
AP3B1-206ENST00000520122 CD96P40200 585 aa8.39□□□□□ -1.07
AP3B1-206ENST00000520122 LRRN4CLQ8ND94 238 aa8.39□□□□□ -1.07
AP3B1-206ENST00000520122 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
AP3B1-206ENST00000520122 KRTAP4-9Q9BYQ8 210 aa8.39□□□□□ -1.07
AP3B1-206ENST00000520122 CCDC86Q9H6F5 360 aaKnown RBP8.39□□□□□ -1.07
AP3B1-206ENST00000520122 SSU72Q9NP77 194 aaKnown RBP8.39□□□□□ -1.07
AP3B1-206ENST00000520122 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
AP3B1-206ENST00000520122 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
AP3B1-206ENST00000520122 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
AP3B1-206ENST00000520122 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
AP3B1-206ENST00000520122 FBLN7Q53RD9 439 aa8.38□□□□□ -1.07
AP3B1-206ENST00000520122 ANGEL2Q5VTE6 544 aaKnown RBP8.38□□□□□ -1.07
AP3B1-206ENST00000520122 ADAMTS6Q9UKP5 1117 aa8.38□□□□□ -1.07
AP3B1-206ENST00000520122 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
AP3B1-206ENST00000520122 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
AP3B1-206ENST00000520122 WDR89Q96FK6 387 aaPredicted RBP8.37□□□□□ -1.07
AP3B1-206ENST00000520122 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
AP3B1-206ENST00000520122 PCOLCE2Q9UKZ9 415 aa8.37□□□□□ -1.07
AP3B1-206ENST00000520122 ARID3CA6NKF2 412 aa8.36□□□□□ -1.07
AP3B1-206ENST00000520122 NDUFB5O43674 189 aa8.36□□□□□ -1.07
AP3B1-206ENST00000520122 PPP1R15AO75807 674 aaPredicted RBP8.36□□□□□ -1.07
AP3B1-206ENST00000520122 HCLS1P14317 486 aaPredicted RBP8.36□□□□□ -1.07
AP3B1-206ENST00000520122 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
AP3B1-206ENST00000520122 RPS26P11Q5JNZ5 115 aaPredicted RBP8.36□□□□□ -1.07
AP3B1-206ENST00000520122 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 LEFTY1O75610 366 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 CEACAM5P06731 702 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 ORC1Q13415 861 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 FAM84AQ96KN4 292 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
AP3B1-206ENST00000520122 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 GSTP1P09211 210 aaKnown RBP8.34□□□□□ -1.07
AP3B1-206ENST00000520122 ITIH2P19823 946 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 GLYCTKQ8IVS8 523 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 DUSP23Q9BVJ7 150 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 TRAK1Q9UPV9 953 aa8.34□□□□□ -1.07
AP3B1-206ENST00000520122 H3BRB1 525 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 ZNF862O60290 1169 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 ICMTO60725 284 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 PPP2R3AQ06190 1150 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 KIF4BQ2VIQ3 1234 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 SLC23A3Q6PIS1 610 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 KCNB2Q92953 911 aa8.33□□□□□ -1.08
AP3B1-206ENST00000520122 TUT1Q9H6E5 874 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms