RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 KIAA1211Q6ZU35 1233 aa8.79□□□□□ -1
NPM1-206ENST00000519955 GRIN3AQ8TCU5 1115 aa8.79□□□□□ -1
NPM1-206ENST00000519955 RHOVQ96L33 236 aa8.79□□□□□ -1
NPM1-206ENST00000519955 RUSC1Q9BVN2 902 aa8.79□□□□□ -1
NPM1-206ENST00000519955 RNF208Q9H0X6 261 aa8.79□□□□□ -1
NPM1-206ENST00000519955 TLR6Q9Y2C9 796 aa8.79□□□□□ -1
NPM1-206ENST00000519955 F8W735 103 aaPredicted RBP8.78□□□□□ -1
NPM1-206ENST00000519955 CTSBP07858 339 aa8.78□□□□□ -1
NPM1-206ENST00000519955 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
NPM1-206ENST00000519955 LMNB2Q03252 620 aa8.78□□□□□ -1
NPM1-206ENST00000519955 DIEXFQ68CQ4 756 aaKnown RBP8.78□□□□□ -1
NPM1-206ENST00000519955 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
NPM1-206ENST00000519955 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
NPM1-206ENST00000519955 ZNF654Q8IZM8 581 aa8.78□□□□□ -1
NPM1-206ENST00000519955 TMPRSS13Q9BYE2 586 aa8.78□□□□□ -1
NPM1-206ENST00000519955 ZC3H12CQ9C0D7 883 aaKnown RBP8.78□□□□□ -1
NPM1-206ENST00000519955 MIR1-1HGQ9H1L0 117 aa8.78□□□□□ -1
NPM1-206ENST00000519955 CCDC86Q9H6F5 360 aaKnown RBP8.78□□□□□ -1
NPM1-206ENST00000519955 CACNA2D2Q9NY47 1150 aa8.78□□□□□ -1
NPM1-206ENST00000519955 DDX41Q9UJV9 622 aaKnown RBP8.78□□□□□ -1
NPM1-206ENST00000519955 SYNGAP1Q96PV0 1343 aa8.78□□□□□ -1
NPM1-206ENST00000519955 MINDY4BA8MYZ0 360 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 F6X3S4 739 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 DLGAP3O95886 979 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
NPM1-206ENST00000519955 CAMK2GQ13555 558 aaPredicted RBP8.77□□□□□ -1.01
NPM1-206ENST00000519955 ZNF394Q53GI3 561 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 DCAF5Q96JK2 942 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 TGIF2Q9GZN2 237 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 AKTIPQ9H8T0 292 aa8.77□□□□□ -1.01
NPM1-206ENST00000519955 PF4P02776 101 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 EIF4A3P38919 411 aaKnown RBP8.76□□□□□ -1.01
NPM1-206ENST00000519955 ADGRE1Q14246 886 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 XP32Q5T750 250 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 NUTM2GQ5VZR2 741 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 GPBAR1Q8TDU6 330 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 SUGCTQ9HAC7 445 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 CYP4F12Q9HCS2 524 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 KCNQ5Q9NR82 932 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 RAD18Q9NS91 495 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 PCDHB5Q9Y5E4 795 aa8.76□□□□□ -1.01
NPM1-206ENST00000519955 KRBA1A5PL33 1030 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 ZNF862O60290 1169 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 SLFN14P0C7P3 912 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 RAD51AP2Q09MP3 1159 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 KIF4BQ2VIQ3 1234 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 ANKRD34AQ69YU3 496 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
NPM1-206ENST00000519955 GAL3ST3Q96A11 431 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.75□□□□□ -1.01
NPM1-206ENST00000519955 PCDHGB7Q9Y5F8 929 aa8.75□□□□□ -1.01
NPM1-206ENST00000519955 AOC2O75106 756 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 LIG1P18858 919 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 RACK1P63244 317 aaKnown RBP8.74□□□□□ -1.01
NPM1-206ENST00000519955 MBTPS1Q14703 1052 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 SNAP47Q5SQN1 464 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 AGGF1Q8N302 714 aaeCLIP8.74□□□□□ -1.01
NPM1-206ENST00000519955 WFDC12Q8WWY7 111 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 WDR18Q9BV38 432 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 CEP41Q9BYV8 373 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 CCSER2Q9H7U1 834 aa8.74□□□□□ -1.01
NPM1-206ENST00000519955 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
NPM1-206ENST00000519955 RANGAP1P46060 587 aaPredicted RBP8.73□□□□□ -1.01
NPM1-206ENST00000519955 SEPT6Q14141 434 aa8.73□□□□□ -1.01
NPM1-206ENST00000519955 FDX2Q6P4F2 183 aa8.73□□□□□ -1.01
NPM1-206ENST00000519955 MPRIPQ6WCQ1 1025 aa8.73□□□□□ -1.01
NPM1-206ENST00000519955 Q6ZS46 218 aa8.73□□□□□ -1.01
NPM1-206ENST00000519955 KIAA0825Q8IV33 1275 aa8.73□□□□□ -1.01
NPM1-206ENST00000519955 WDR89Q96FK6 387 aaPredicted RBP8.73□□□□□ -1.01
NPM1-206ENST00000519955 ADAMTS1Q9UHI8 967 aa8.73□□□□□ -1.01
NPM1-206ENST00000519955 ALX3O95076 343 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 GARTP22102 1010 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 NOS3P29474 1203 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
NPM1-206ENST00000519955 FAM160A1Q05DH4 1040 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 FBXL19Q6PCT2 694 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 GOLM1Q8NBJ4 401 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 ZNF296Q8WUU4 475 aaPredicted RBP8.72□□□□□ -1.01
NPM1-206ENST00000519955 GATAD2BQ8WXI9 593 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 SPON2Q9BUD6 331 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 PCDHA4Q9UN74 947 aa8.72□□□□□ -1.01
NPM1-206ENST00000519955 GREM1O60565 184 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 TIAF1O95411 115 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 GLB1P16278 677 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 CHRNA4P43681 627 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 PTPN11Q06124 597 aaPredicted RBP8.71□□□□□ -1.02
NPM1-206ENST00000519955 AKAP4Q5JQC9 854 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 CD163Q86VB7 1156 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 JARID2Q92833 1246 aaPredicted RBP8.71□□□□□ -1.02
NPM1-206ENST00000519955 PCDHGC5Q9Y5F6 944 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 ROBO2Q9HCK4 1378 aa8.71□□□□□ -1.02
NPM1-206ENST00000519955 C1QTNF9BB2RNN3 333 aa8.7□□□□□ -1.02
NPM1-206ENST00000519955 F13A1P00488 732 aa8.7□□□□□ -1.02
NPM1-206ENST00000519955 ADH5P11766 374 aa8.7□□□□□ -1.02
NPM1-206ENST00000519955 ID3Q02535 119 aa8.7□□□□□ -1.02
NPM1-206ENST00000519955 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
NPM1-206ENST00000519955 BNC2Q6ZN30 1099 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 424.7 ms