RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 HPS5Q9UPZ3 1129 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 PRKAB2O43741 272 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 ADRA2BP18089 450 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 GUCY1B3Q02153 619 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 SART3Q15020 963 aaKnown RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 SYNE3Q6ZMZ3 975 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 RAB11FIP4Q86YS3 637 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 NUP62CLQ9H1M0 184 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 TOMM22Q9NS69 142 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 MAST2Q6P0Q8 1798 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 COL1A1P02452 1464 aaPredicted RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 CCDC69A6NI79 296 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 IFIT3O14879 490 aaKnown RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 ZBTB43O43298 467 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 PPFIA3O75145 1194 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 HIBADHP31937 336 aaKnown RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 FBXO33Q7Z6M2 555 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 CCDC24Q8N4L8 307 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 CNBD1Q8NA66 436 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 STAG1Q8WVM7 1258 aa9.85□□□□□ -0.83
HMGB4-203ENST00000519684 FAM84BQ96KN1 310 aaPredicted RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 DDX19AQ9NUU7 478 aaKnown RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 PDS5AQ29RF7 1337 aaKnown RBP9.85□□□□□ -0.83
HMGB4-203ENST00000519684 ERICH2A1L162 156 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 GOLGA8AA7E2F4 631 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 KDM4AO75164 1064 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 FDPSP14324 419 aaKnown RBP9.84□□□□□ -0.83
HMGB4-203ENST00000519684 UVSSAQ2YD98 709 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
HMGB4-203ENST00000519684 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 LIG1P18858 919 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 LIFRP42702 1097 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 CEBPZQ03701 1054 aaKnown RBP9.84□□□□□ -0.83
HMGB4-203ENST00000519684 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 GIMAP6Q6P9H5 292 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 AMIGO3Q86WK7 504 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 IGDCC4Q8TDY8 1250 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 LY9Q9HBG7 655 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 SLC12A7Q9Y666 1083 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 CACNA1SQ13698 1873 aa9.84□□□□□ -0.83
HMGB4-203ENST00000519684 CCDC192P0DO97 292 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 PPARAQ07869 468 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 NFIXQ14938 502 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 SGMS1Q86VZ5 419 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 MICU3Q86XE3 530 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 RGS22Q8NE09 1264 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 TNMDQ9H2S6 317 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 TFCP2L1Q9NZI6 479 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 ZSWIM5Q9P217 1185 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 CCDC88AQ3V6T2 1871 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 WTIPA6NIX2 430 aaPredicted RBP9.83□□□□□ -0.84
HMGB4-203ENST00000519684 MINDY4BA8MYZ0 360 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 CHAF1AQ13111 956 aaPredicted RBP9.83□□□□□ -0.84
HMGB4-203ENST00000519684 GRAPQ13588 217 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 TRIM29Q14134 588 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 WTAPQ15007 396 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 TMED8Q6PL24 325 aaPredicted RBP9.83□□□□□ -0.84
HMGB4-203ENST00000519684 BRAPQ7Z569 592 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 ADGRA1Q86SQ6 560 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 FBXO18Q8NFZ0 1043 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 GRAPLQ8TC17 118 aaPredicted RBP9.83□□□□□ -0.84
HMGB4-203ENST00000519684 RPGRQ92834 1020 aaKnown RBP9.83□□□□□ -0.84
HMGB4-203ENST00000519684 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 QTRT2Q9H974 415 aaKnown RBP9.83□□□□□ -0.84
HMGB4-203ENST00000519684 DACT1Q9NYF0 836 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 ANKIB1Q9P2G1 1089 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 RCOR1Q9UKL0 485 aa9.83□□□□□ -0.84
HMGB4-203ENST00000519684 ECM29Q5VYK3 1845 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ESPNB1AK53 854 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 HMGB2P26583 209 aaKnown RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 KLRK1P26718 216 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ST5P78524 1137 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 SLC27A3Q5K4L6 730 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 SPTY2D1Q68D10 685 aaPredicted RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 TMTC2Q8N394 836 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 SDR42E1Q8WUS8 393 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 PDLIM2Q96JY6 352 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 UBAC1Q9BSL1 405 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ALG1Q9BT22 464 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 BRIP1Q9BX63 1249 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 CLSTN2Q9H4D0 955 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 RRAGDQ9NQL2 400 aaPredicted RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 INCENPQ9NQS7 918 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ANAPC4Q9UJX5 808 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 RXRAP19793 462 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 TM4SF1P30408 202 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 GNL2Q13823 731 aaKnown RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 HS1BP3Q53T59 392 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 CCDC73Q6ZRK6 1079 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 CCDC144CPQ8IYA2 1237 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ESR2Q92731 530 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 USP28Q96RU2 1077 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms