RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CSADQ9Y600 493 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 SNCAIPQ9Y6H5 919 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 TNRC18O15417 2968 aaPredicted RBP15.45■□□□□ 0.06
CSMD1-205ENST00000519623 SPDYE5A6NIY4 337 aa15.45■□□□□ 0.06
CSMD1-205ENST00000519623 GTF2A2P52657 109 aa15.45■□□□□ 0.06
CSMD1-205ENST00000519623 HOOK2Q96ED9 719 aa15.45■□□□□ 0.06
CSMD1-205ENST00000519623 OTUD5Q96G74 571 aa15.45■□□□□ 0.06
CSMD1-205ENST00000519623 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
CSMD1-205ENST00000519623 PDE4DIPQ5VU43 2346 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 CCL15-CCL14A0A0B4J2E2 113 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 CAP1Q01518 475 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 TFCP2Q12800 502 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 NFIAQ12857 509 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 CCL15Q16663 113 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 MIGA2Q7L4E1 593 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 OTOP1Q7RTM1 612 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 ERO1BQ86YB8 467 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
CSMD1-205ENST00000519623 WRNIP1Q96S55 665 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 USP40Q9NVE5 1235 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 FAM198AQ9UFP1 575 aa15.44■□□□□ 0.06
CSMD1-205ENST00000519623 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
CSMD1-205ENST00000519623 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 TCP10Q12799 353 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 RASGRF1Q13972 1273 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 ZFPM1Q8IX07 1006 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 FAM43AQ8N2R8 423 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 CLUAP1Q96AJ1 413 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 ZNF112Q9UJU3 913 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 AKAP2Q9Y2D5 859 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 TRIM17Q9Y577 477 aa15.43■□□□□ 0.06
CSMD1-205ENST00000519623 IRF6O14896 467 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 GNAI2P04899 355 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 INPP5BP32019 993 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 SP3Q02447 781 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 MIER1Q8N108 512 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 CD99L2Q8TCZ2 262 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 FAM163AQ96GL9 167 aaPredicted RBP15.42■□□□□ 0.06
CSMD1-205ENST00000519623 ZNF341Q9BYN7 854 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 AK9Q5TCS8 1911 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 MYH2Q9UKX2 1941 aa15.42■□□□□ 0.06
CSMD1-205ENST00000519623 PDS5AQ29RF7 1337 aaKnown RBP15.42■□□□□ 0.06
CSMD1-205ENST00000519623 PNMA6EA0A0J9YXQ4 647 aa15.41■□□□□ 0.06
CSMD1-205ENST00000519623 CETPP11597 493 aa15.41■□□□□ 0.06
CSMD1-205ENST00000519623 PPIL2Q13356 520 aa15.41■□□□□ 0.06
CSMD1-205ENST00000519623 TAF1CQ15572 869 aaPredicted RBP15.41■□□□□ 0.06
CSMD1-205ENST00000519623 ZGPATQ8N5A5 531 aaKnown RBP15.41■□□□□ 0.06
CSMD1-205ENST00000519623 ZFYVE28Q9HCC9 887 aa15.41■□□□□ 0.06
CSMD1-205ENST00000519623 GAKO14976 1311 aa15.41■□□□□ 0.06
CSMD1-205ENST00000519623 BTBD19C9JJ37 291 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 PPATQ06203 517 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 SNAPC2Q13487 334 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
CSMD1-205ENST00000519623 TMEM57Q8N5G2 664 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 IDI2Q9BXS1 227 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 EFCC1Q9HA90 598 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 PTPN22Q9Y2R2 807 aa15.4■□□□□ 0.06
CSMD1-205ENST00000519623 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
CSMD1-205ENST00000519623 ZNF384Q8TF68 577 aa15.39■□□□□ 0.05
CSMD1-205ENST00000519623 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
CSMD1-205ENST00000519623 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 ENTPD3O75355 529 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 RGS3P49796 1198 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
CSMD1-205ENST00000519623 MAP3K10Q02779 954 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.05
CSMD1-205ENST00000519623 SPTY2D1Q68D10 685 aaPredicted RBP15.38■□□□□ 0.05
CSMD1-205ENST00000519623 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 ZCCHC17Q9NP64 241 aaKnown RBP15.38■□□□□ 0.05
CSMD1-205ENST00000519623 HMG20BQ9P0W2 317 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 KCNH4Q9UQ05 1017 aa15.38■□□□□ 0.05
CSMD1-205ENST00000519623 ATRNL1Q5VV63 1379 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 HTTP42858 3142 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 GPR75-ASB3A0A0A6YYF3 556 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 TLR2O60603 784 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
CSMD1-205ENST00000519623 MECOMQ03112 1051 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 POLA2Q14181 598 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
CSMD1-205ENST00000519623 DZIP1Q86YF9 867 aaKnown RBP15.37■□□□□ 0.05
CSMD1-205ENST00000519623 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
CSMD1-205ENST00000519623 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
CSMD1-205ENST00000519623 KIAA0100Q14667 2235 aaKnown RBP15.37■□□□□ 0.05
CSMD1-205ENST00000519623 RFX7Q2KHR2 1363 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
CSMD1-205ENST00000519623 BTDP43251 543 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 MOGSQ13724 837 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 DIEXFQ68CQ4 756 aaKnown RBP15.36■□□□□ 0.05
CSMD1-205ENST00000519623 PI16Q6UXB8 463 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 SPATA5Q8NB90 893 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 SSH3Q8TE77 659 aa15.36■□□□□ 0.05
CSMD1-205ENST00000519623 DDX4Q9NQI0 724 aaKnown RBP15.36■□□□□ 0.05
CSMD1-205ENST00000519623 MROH7-TTC4A0A0A0MT08 1334 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms