RNA–Protein interactions for RNA: ENST00000518844.5

RUNX1T1-215, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1T1, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-215ENST00000518844 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 MYH3P11055 1940 aa11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 TPM1P09493 284 aa11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 IFIT1P09914 478 aaKnown RBP11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 VPS72Q15906 364 aa11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 PDCD2Q16342 344 aaPredicted RBP11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
RUNX1T1-215ENST00000518844 FAM177BA6PVY3 158 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 CPP00450 1065 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 KCNQ4P56696 695 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 ZNF280DQ6N043 979 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 ACRBPQ8NEB7 543 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 XAGE2Q96GT9 111 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 CHAMP1Q96JM3 812 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 MTA3Q9BTC8 594 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 FKBP4Q02790 459 aaKnown RBP eCLIP11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 GPS2Q13227 327 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 MCMDC2Q4G0Z9 681 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 VPS53Q5VIR6 699 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 FOXD4L4Q8WXT5 416 aaPredicted RBP11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
RUNX1T1-215ENST00000518844 SH3TC1Q8TE82 1336 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 PDE8AO60658 829 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 LARGE1O95461 756 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 SCARF1Q14162 830 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 METTL24Q5JXM2 366 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 ZNF397Q8NF99 534 aaPredicted RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 PDRG1Q9NUG6 133 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 RREB1Q92766 1687 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 CICQ96RK0 1608 aaPredicted RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 TRIM66O15016 1216 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 SMC2O95347 1197 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 ICA1Q05084 483 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 HSP90B2PQ58FF3 399 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 USPL1Q5W0Q7 1092 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 TRIM74Q86UV6 250 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 TRIM73Q86UV7 250 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 HELBQ8NG08 1087 aaPredicted RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 ATL2Q8NHH9 583 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
RUNX1T1-215ENST00000518844 ZRANB2O95218 330 aaKnown RBP eCLIP11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 FAM163BP0C2L3 166 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 SKILP12757 684 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 VGLL2Q8N8G2 317 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 FAXDC2Q96IV6 333 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 CPSF2Q9P2I0 782 aaKnown RBP11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 V9GYY5 206 aaPredicted RBP11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 RAD21O60216 631 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 BRD1O95696 1058 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 USP8P40818 1118 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 TTC39AQ5SRH9 613 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 EFCAB13Q8IY85 973 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 HMG20BQ9P0W2 317 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
RUNX1T1-215ENST00000518844 COL5A3P25940 1745 aaPredicted RBP11.27□□□□□ -0.6
RUNX1T1-215ENST00000518844 DTNBO60941 627 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 BMS1Q14692 1282 aaKnown RBP11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 LINC00116Q8NCU8 138 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 MIEF2Q96C03 454 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 USP21Q9UK80 565 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 CYP21A2P08686 494 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 PSMA5P28066 241 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 ZMYM1Q5SVZ6 1142 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 CXorf38Q8TB03 319 aa11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
RUNX1T1-215ENST00000518844 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
RUNX1T1-215ENST00000518844 MAST3O60307 1309 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms