RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 JAG2Q9Y219 1238 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 MROH7-TTC4A0A0A0MT08 1334 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 PLCG2P16885 1265 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 PPP4CP60510 307 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 FKBP1AP62942 108 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 GTF2IP78347 998 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 Q6ZUG5 572 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 FAM163AQ96GL9 167 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 AGXT2Q9BYV1 514 aa17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 BAZ2AQ9UIF9 1905 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-205ENST00000518839 PRKAB2O43741 272 aa17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 PCP11498 1178 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 DPEP1P16444 411 aa17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 DYNLL1P63167 89 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 R3HDM1Q15032 1099 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 MB21D2Q8IYB1 491 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 KRT23Q9C075 422 aa17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 VPS33BQ9H267 617 aa17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 AATFQ9NY61 560 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 BRCA1P38398 1863 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 PSME4Q14997 1843 aa17.81■□□□□ 0.44
TRAPPC9-205ENST00000518839 NAV1Q8NEY1 1877 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 KIAA2012Q0VF49 1180 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 STAG1Q8WVM7 1258 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 PSMD1Q99460 953 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 PIM2Q9P1W9 311 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 ATF5Q9Y2D1 282 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 CDK5RAP2Q96SN8 1893 aa17.8■□□□□ 0.44
TRAPPC9-205ENST00000518839 KCNA3P22001 575 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 NT5C2P49902 561 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 DOK7Q18PE1 504 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 TBC1D10CQ8IV04 446 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 SDR42E1Q8WUS8 393 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
TRAPPC9-205ENST00000518839 GAKO14976 1311 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 ZNF646O15015 1829 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 FOCADQ5VW36 1801 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 GPR75-ASB3A0A0A6YYF3 556 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 C21orf2O43822 256 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 SLC3A2P08195 630 aaKnown RBP17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 PDIA4P13667 645 aaKnown RBP17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 PPARAQ07869 468 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 RAB3GAP1Q15042 981 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 ME3Q16798 604 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 SBK1Q52WX2 424 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 STRIP1Q5VSL9 837 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 TMEM87BQ96K49 555 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 TCEANC2Q96MN5 208 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 NBPF3Q9H094 633 aa17.78■□□□□ 0.44
TRAPPC9-205ENST00000518839 PRC1O43663 620 aa17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 ECE2O60344 883 aa17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 AMOTL1Q8IY63 956 aa17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 BRF1Q92994 677 aa17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 FBXW7Q969H0 707 aa17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 ZNF274Q96GC6 653 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 DCP1AQ9NPI6 582 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.44
TRAPPC9-205ENST00000518839 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 LARGE1O95461 756 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 USP5P45974 858 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 EVCP57679 992 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 COL9A3Q14050 684 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 DIXDC1Q155Q3 683 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 GRIK5Q16478 980 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 CCDC83Q8IWF9 413 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
TRAPPC9-205ENST00000518839 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 USP17L3A6NCW0 530 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 USP17L4A6NCW7 530 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 MINDY4BA8MYZ0 360 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 BTDP43251 543 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 USP17L1Q7RTZ2 530 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 LARP6Q9BRS8 491 aaKnown RBP17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 MRIQ9BWK5 157 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
TRAPPC9-205ENST00000518839 NEDD4P46934 1319 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 B4E1Z4 1266 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 PFKFB2O60825 505 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 ANTXR2P58335 489 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 HDLBPQ00341 1268 aaKnown RBP17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 AOC3Q16853 763 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 CTR9Q6PD62 1173 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 HHIPL2Q6UWX4 724 aa17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 SH3RF3Q8TEJ3 882 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC9-205ENST00000518839 ESR2Q92731 530 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms