RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 MYH2Q9UKX2 1941 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 OTOFQ9HC10 1997 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 SPRYD7Q5W111 196 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 ERC1Q8IUD2 1116 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 IDI2Q9BXS1 227 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 FAM198AQ9UFP1 575 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 FZD1Q9UP38 647 aa13.94□□□□□ -0.18
IGHV3-25-201ENST00000518224 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 MAP4K4O95819 1239 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 ZBTB48P10074 688 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 IREB2P48200 963 aaKnown RBP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 CACNB3P54284 484 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 ANKRD13AQ8IZ07 590 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 FAM151AQ8WW52 585 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 CLMNQ96JQ2 1002 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 CFHR5Q9BXR6 569 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 RNF186Q9NXI6 227 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 TMOD2Q9NZR1 351 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
IGHV3-25-201ENST00000518224 MROH7-TTC4A0A0A0MT08 1334 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 RHBDL3P58872 404 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 MAP3K10Q02779 954 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 MECOMQ03112 1051 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 NFIAQ12857 509 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 OS9Q13438 667 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 NOM1Q5C9Z4 860 aaKnown RBP13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 ERICH6Q7L0X2 663 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
IGHV3-25-201ENST00000518224 HTTP42858 3142 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 HMMRO75330 724 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 ENTPD3O75355 529 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 WDHD1O75717 1129 aaPredicted RBP13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 GJA5P36382 358 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 PRKG1Q13976 671 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 DZIP1Q86YF9 867 aaKnown RBP13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 HOOK2Q96ED9 719 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 SLC10A4Q96EP9 437 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 WNK4Q96J92 1243 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 ABCF2Q9UG63 623 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 ZNF112Q9UJU3 913 aa13.91□□□□□ -0.18
IGHV3-25-201ENST00000518224 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 CYP2E1P05181 493 aaPredicted RBP13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 INHBEP58166 350 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 MAP3K9P80192 1104 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 TNS4Q8IZW8 715 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 USP40Q9NVE5 1235 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 COL2A1P02458 1487 aaPredicted RBP13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 MAST2Q6P0Q8 1798 aa13.9□□□□□ -0.18
IGHV3-25-201ENST00000518224 MANSC4A6NHS7 340 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 LDHCP07864 332 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 GSTO1P78417 241 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 SREBF2Q12772 1141 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 VGLL4Q14135 290 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 TTC39AQ5SRH9 613 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 CCDC8Q9H0W5 538 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 TSKSQ9UJT2 592 aa13.89□□□□□ -0.19
IGHV3-25-201ENST00000518224 TRPA1O75762 1119 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 BTDP43251 543 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 RGS3P49796 1198 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 PPP4CP60510 307 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 DCAF15Q66K64 600 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 ZFPM1Q8IX07 1006 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 DDX4Q9NQI0 724 aaKnown RBP13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 SNCAIPQ9Y6H5 919 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 CASP8AP2Q9UKL3 1982 aa13.88□□□□□ -0.19
IGHV3-25-201ENST00000518224 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 ZAP70P43403 619 aa13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 AACSQ86V21 672 aa13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 ZNF341Q9BYN7 854 aa13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 PIH1D3Q9NQM4 214 aaKnown RBP13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
IGHV3-25-201ENST00000518224 PHF20L1A8MW92 1017 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 ALDH1A1P00352 501 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 TCP10Q12799 353 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 NOL9Q5SY16 702 aaKnown RBP13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms