RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 SLFN14P0C7P3 912 aa8.34□□□□□ -1.07
CSMD1-203ENST00000518151 MSMPQ1L6U9 139 aa8.34□□□□□ -1.07
CSMD1-203ENST00000518151 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
CSMD1-203ENST00000518151 EPS8L3Q8TE67 593 aaKnown RBP8.34□□□□□ -1.07
CSMD1-203ENST00000518151 WDR18Q9BV38 432 aa8.34□□□□□ -1.07
CSMD1-203ENST00000518151 ADMP35318 185 aa8.33□□□□□ -1.08
CSMD1-203ENST00000518151 KRT82Q9NSB4 513 aa8.33□□□□□ -1.08
CSMD1-203ENST00000518151 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
CSMD1-203ENST00000518151 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 PRNPP04156 253 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 MAPK1P28482 360 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 VSIG10LQ86VR7 867 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 BSDC1Q9NW68 430 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-203ENST00000518151 GPN3Q9UHW5 284 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-203ENST00000518151 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
CSMD1-203ENST00000518151 GSTP1P09211 210 aaKnown RBP8.31□□□□□ -1.08
CSMD1-203ENST00000518151 FCGRTP55899 365 aa8.31□□□□□ -1.08
CSMD1-203ENST00000518151 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
CSMD1-203ENST00000518151 FAAP100Q0VG06 881 aa8.31□□□□□ -1.08
CSMD1-203ENST00000518151 GATA6Q92908 595 aa8.31□□□□□ -1.08
CSMD1-203ENST00000518151 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
CSMD1-203ENST00000518151 PIDD1Q9HB75 910 aa8.31□□□□□ -1.08
CSMD1-203ENST00000518151 FAM170BA6NMN3 283 aa8.3□□□□□ -1.08
CSMD1-203ENST00000518151 TAL1P17542 331 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-203ENST00000518151 ZNF157P51786 506 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-203ENST00000518151 ID3Q02535 119 aa8.3□□□□□ -1.08
CSMD1-203ENST00000518151 CCDC86Q9H6F5 360 aaKnown RBP8.3□□□□□ -1.08
CSMD1-203ENST00000518151 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
CSMD1-203ENST00000518151 PNMA6FA0A0J9YX94 578 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
CSMD1-203ENST00000518151 TREHO43280 583 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 LIG1P18858 919 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 TXKP42681 527 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 DSC3Q14574 896 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 KIF4BQ2VIQ3 1234 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
CSMD1-203ENST00000518151 SHISA5Q8N114 240 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 CRIM1Q9NZV1 1036 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
CSMD1-203ENST00000518151 TMPRSS2O15393 492 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 ENOX2Q16206 610 aaKnown RBP8.28□□□□□ -1.08
CSMD1-203ENST00000518151 OGFOD3Q6PK18 319 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 SEZ6L2Q6UXD5 910 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 FBF1Q8TES7 1133 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 EMILIN2Q9BXX0 1053 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
CSMD1-203ENST00000518151 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 C1GALT1Q9NS00 363 aa8.28□□□□□ -1.08
CSMD1-203ENST00000518151 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
CSMD1-203ENST00000518151 SRCIN1Q9C0H9 1055 aa8.27□□□□□ -1.09
CSMD1-203ENST00000518151 AKAP2Q9Y2D5 859 aa8.27□□□□□ -1.09
CSMD1-203ENST00000518151 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 ZNF862O60290 1169 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 PI16Q6UXB8 463 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 SULF2Q8IWU5 870 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 TP53INP2Q8IXH6 220 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 AGBL5Q8NDL9 886 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 KCNB2Q92953 911 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 WDR89Q96FK6 387 aaPredicted RBP8.26□□□□□ -1.09
CSMD1-203ENST00000518151 FANCD2OSQ96PS1 177 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 ADGRE2Q9UHX3 823 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 SAMM50Q9Y512 469 aa8.26□□□□□ -1.09
CSMD1-203ENST00000518151 NME2P22392 152 aa8.25□□□□□ -1.09
CSMD1-203ENST00000518151 GSTT1P30711 240 aa8.25□□□□□ -1.09
CSMD1-203ENST00000518151 NXPE4Q6UWF7 544 aa8.25□□□□□ -1.09
CSMD1-203ENST00000518151 SMYD4Q8IYR2 804 aaPredicted RBP8.25□□□□□ -1.09
CSMD1-203ENST00000518151 ABI1Q8IZP0 508 aa8.25□□□□□ -1.09
CSMD1-203ENST00000518151 FMNL2Q96PY5 1086 aa8.25□□□□□ -1.09
CSMD1-203ENST00000518151 CEP44Q9C0F1 390 aa8.25□□□□□ -1.09
CSMD1-203ENST00000518151 GIPC1O14908 333 aa8.24□□□□□ -1.09
CSMD1-203ENST00000518151 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
CSMD1-203ENST00000518151 ARNTP27540 789 aa8.24□□□□□ -1.09
CSMD1-203ENST00000518151 KCNA1Q09470 495 aa8.24□□□□□ -1.09
CSMD1-203ENST00000518151 PDZD3Q86UT5 571 aa8.24□□□□□ -1.09
CSMD1-203ENST00000518151 FLCNQ8NFG4 579 aa8.24□□□□□ -1.09
CSMD1-203ENST00000518151 LGR6Q9HBX8 967 aa8.24□□□□□ -1.09
CSMD1-203ENST00000518151 ZC3H7BQ9UGR2 993 aaKnown RBP8.24□□□□□ -1.09
CSMD1-203ENST00000518151 ALG1LQ6GMV1 187 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 GOLGA2P5Q9HBQ8 144 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 DISC1Q9NRI5 854 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 PCOLCE2Q9UKZ9 415 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 PPM1HQ9ULR3 514 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 PCDHGC5Q9Y5F6 944 aa8.23□□□□□ -1.09
CSMD1-203ENST00000518151 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
CSMD1-203ENST00000518151 MAPK8P45983 427 aa8.22□□□□□ -1.09
CSMD1-203ENST00000518151 ATP2B2Q01814 1243 aa8.22□□□□□ -1.09
CSMD1-203ENST00000518151 TTLL4Q14679 1199 aa8.22□□□□□ -1.09
CSMD1-203ENST00000518151 MAP1SQ66K74 1059 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-203ENST00000518151 MISP3Q96FF7 219 aa8.22□□□□□ -1.09
CSMD1-203ENST00000518151 SLC5A6Q9Y289 635 aa8.22□□□□□ -1.09
CSMD1-203ENST00000518151 RNF114Q9Y508 228 aa8.22□□□□□ -1.09
CSMD1-203ENST00000518151 PATL2C9JE40 543 aaKnown RBP8.21□□□□□ -1.1
CSMD1-203ENST00000518151 FAM87AP0C7U9 286 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms