RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 CLEC17AQ6ZS10 378 aa27.6■■■□□ 2.01
SLIT3-204ENST00000518140 B4E1Z4 1266 aa27.6■■■□□ 2.01
SLIT3-204ENST00000518140 DIXDC1Q155Q3 683 aa27.6■■■□□ 2.01
SLIT3-204ENST00000518140 STYK1Q6J9G0 422 aa27.6■■■□□ 2.01
SLIT3-204ENST00000518140 GTF3C6Q969F1 213 aa27.6■■■□□ 2.01
SLIT3-204ENST00000518140 GBP4Q96PP9 640 aa27.6■■■□□ 2.01
SLIT3-204ENST00000518140 DUOX1Q9NRD9 1551 aa27.59■■■□□ 2.01
SLIT3-204ENST00000518140 QSER1Q2KHR3 1735 aa27.59■■■□□ 2.01
SLIT3-204ENST00000518140 RTN4Q9NQC3 1192 aaKnown RBP27.59■■■□□ 2.01
SLIT3-204ENST00000518140 SYT1P21579 422 aa27.58■■■□□ 2.01
SLIT3-204ENST00000518140 SCRN1Q12765 414 aa27.58■■■□□ 2.01
SLIT3-204ENST00000518140 TRDNQ13061 729 aa27.58■■■□□ 2.01
SLIT3-204ENST00000518140 FBXL16Q8N461 479 aa27.58■■■□□ 2.01
SLIT3-204ENST00000518140 CYP2D7A0A087X1C5 515 aa27.57■■■□□ 2
SLIT3-204ENST00000518140 DOK7Q18PE1 504 aa27.57■■■□□ 2
SLIT3-204ENST00000518140 ZC3H12CQ9C0D7 883 aaKnown RBP27.57■■■□□ 2
SLIT3-204ENST00000518140 MINDY4BA8MYZ0 360 aa27.56■■■□□ 2
SLIT3-204ENST00000518140 PFKFB2O60825 505 aa27.56■■■□□ 2
SLIT3-204ENST00000518140 PDIA3P30101 505 aaKnown RBP27.56■■■□□ 2
SLIT3-204ENST00000518140 AKNAD1Q5T1N1 836 aa27.56■■■□□ 2
SLIT3-204ENST00000518140 NAP1L2Q9ULW6 460 aaPredicted RBP27.56■■■□□ 2
SLIT3-204ENST00000518140 JAK2O60674 1132 aa27.56■■■□□ 2
SLIT3-204ENST00000518140 CCT2P78371 535 aaKnown RBP27.56■■■□□ 2
SLIT3-204ENST00000518140 EVX2Q03828 476 aa27.56■■■□□ 2
SLIT3-204ENST00000518140 GTF2IP78347 998 aa27.55■■■□□ 2
SLIT3-204ENST00000518140 PPARAQ07869 468 aa27.55■■■□□ 2
SLIT3-204ENST00000518140 NCOA5Q9HCD5 579 aaKnown RBP27.55■■■□□ 2
SLIT3-204ENST00000518140 SLX4Q8IY92 1834 aa27.55■■■□□ 2
SLIT3-204ENST00000518140 MFSD14BQ5SR56 506 aa27.55■■■□□ 2
SLIT3-204ENST00000518140 ZSWIM5Q9P217 1185 aa27.55■■■□□ 2
SLIT3-204ENST00000518140 COA1Q9GZY4 146 aa27.54■■■□□ 2
SLIT3-204ENST00000518140 TMX4Q9H1E5 349 aaPredicted RBP27.54■■■□□ 2
SLIT3-204ENST00000518140 SENP2Q9HC62 589 aa27.54■■■□□ 2
SLIT3-204ENST00000518140 STX6O43752 255 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 EVCP57679 992 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 MFSD6Q6ZSS7 791 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 STAG1Q8WVM7 1258 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 ZNF274Q96GC6 653 aaPredicted RBP27.53■■■□□ 2
SLIT3-204ENST00000518140 CHD4Q14839 1912 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 KDM4AO75164 1064 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 CTR9Q6PD62 1173 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 C7orf43Q8WVR3 580 aa27.53■■■□□ 2
SLIT3-204ENST00000518140 CTDNEP1O95476 244 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 RRP12Q5JTH9 1297 aaKnown RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 MCTP1Q6DN14 999 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 RAB11FIP4Q86YS3 637 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 CRNKL1Q9BZJ0 848 aaKnown RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 DCP1AQ9NPI6 582 aaPredicted RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 CCDC88AQ3V6T2 1871 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 FAM205AQ6ZU69 1335 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 WDR19Q8NEZ3 1342 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 WDR33Q9C0J8 1336 aaKnown RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 DDX11L8A8MPP1 907 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 USP17L12C9JPN9 530 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 USP17L21D6R901 530 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 FOXD4L6Q3SYB3 417 aaPredicted RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 FOXD4L3Q6VB84 417 aaPredicted RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 SH3RF3Q8TEJ3 882 aaPredicted RBP27.52■■■□□ 2
SLIT3-204ENST00000518140 CNKSR1Q969H4 720 aa27.52■■■□□ 2
SLIT3-204ENST00000518140 IGDCC4Q8TDY8 1250 aa27.51■■□□□ 1.99
SLIT3-204ENST00000518140 MXD3Q9BW11 206 aa27.51■■□□□ 1.99
SLIT3-204ENST00000518140 ANAPC4Q9UJX5 808 aa27.51■■□□□ 1.99
SLIT3-204ENST00000518140 KLF18A0A0U1RQI7 1052 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 PPFIA3O75145 1194 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 TMED8Q6PL24 325 aaPredicted RBP27.5■■□□□ 1.99
SLIT3-204ENST00000518140 KCNQ5Q9NR82 932 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 TOMM22Q9NS69 142 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 HPS5Q9UPZ3 1129 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 BAZ2AQ9UIF9 1905 aaKnown RBP27.5■■□□□ 1.99
SLIT3-204ENST00000518140 MAST2Q6P0Q8 1798 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 SH2B2O14492 632 aaPredicted RBP27.5■■□□□ 1.99
SLIT3-204ENST00000518140 ZSCAN22P10073 491 aaPredicted RBP27.5■■□□□ 1.99
SLIT3-204ENST00000518140 GSTO1P78417 241 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 GIMAP6Q6P9H5 292 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 FBXW7Q969H0 707 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 DDX11Q96FC9 970 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 MTMR6Q9Y217 621 aa27.5■■□□□ 1.99
SLIT3-204ENST00000518140 CYP2D6P10635 497 aa27.49■■□□□ 1.99
SLIT3-204ENST00000518140 LARP1BQ659C4 914 aaKnown RBP27.49■■□□□ 1.99
SLIT3-204ENST00000518140 CERS5Q8N5B7 392 aa27.49■■□□□ 1.99
SLIT3-204ENST00000518140 RTFDC1Q9BY42 306 aaPredicted RBP27.49■■□□□ 1.99
SLIT3-204ENST00000518140 TRAK2O60296 914 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 NSUN7Q8NE18 718 aaKnown RBP27.48■■□□□ 1.99
SLIT3-204ENST00000518140 SLC16A10Q8TF71 515 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 CNNM2Q9H8M5 875 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 ANGEL1Q9UNK9 670 aaKnown RBP27.48■■□□□ 1.99
SLIT3-204ENST00000518140 MROH7-TTC4A0A0A0MT08 1334 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 ZBTB7AO95365 584 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 CCDC125Q86Z20 511 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 TBC1D22AQ8WUA7 517 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 ZKSCAN3Q9BRR0 538 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 KRT23Q9C075 422 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 DBNDD1Q9H9R9 158 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 ATP8A2Q9NTI2 1148 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 TIAM2Q8IVF5 1701 aa27.48■■□□□ 1.99
SLIT3-204ENST00000518140 PPP4CP60510 307 aa27.47■■□□□ 1.99
SLIT3-204ENST00000518140 C10orf71Q711Q0 1435 aa27.47■■□□□ 1.99
SLIT3-204ENST00000518140 LDHCP07864 332 aa27.47■■□□□ 1.99
SLIT3-204ENST00000518140 SLC4A8Q2Y0W8 1093 aa27.47■■□□□ 1.99
SLIT3-204ENST00000518140 SMARCC2Q8TAQ2 1214 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms