RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 TMTC2Q8N394 836 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 FBXO18Q8NFZ0 1043 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 GIMAP7Q8NHV1 300 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 IL25Q9H293 177 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CNNM2Q9H8M5 875 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 PRR36Q9H6K5 1346 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 DLC1Q96QB1 1528 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC151A5D8V7 595 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 WHAMMP3Q1A5X7 153 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 DNAJC21Q5F1R6 531 aaKnown RBP7.57□□□□□ -1.2
CPNE3-203ENST00000517490 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 TMTC1Q8IUR5 882 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 MICALL1Q8N3F8 863 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC51Q96ER9 411 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 KRT23Q9C075 422 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 COPRSQ9NQ92 184 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CLIC4Q9Y696 253 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CARMIL3Q8ND23 1372 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 PPLO60437 1756 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CDC42BPGQ6DT37 1551 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CYP2C19P33261 490 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 AFMP43652 599 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 MNAT1P51948 309 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 PNOCQ13519 176 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 RRAGBQ5VZM2 374 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 FAM76AQ8TAV0 307 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 KCNB2Q92953 911 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 ALS2CR12Q96Q35 445 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 FTOQ9C0B1 505 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPNE3-203ENST00000517490 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
CPNE3-203ENST00000517490 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 NEURL1BA8MQ27 555 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 KRT86O43790 486 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 ACTN2P35609 894 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 POSTNQ15063 836 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 RTN1Q16799 776 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 LONRF2Q1L5Z9 754 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 KRT40Q6A162 431 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 SRGAP1Q7Z6B7 1085 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 VSTM4Q8IW00 320 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 JADE2Q9NQC1 790 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 ANGEL1Q9UNK9 670 aaKnown RBP7.57□□□□□ -1.2
CPNE3-203ENST00000517490 ADGRL3Q9HAR2 1447 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 CYP26C1Q6V0L0 522 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 MFSD6Q6ZSS7 791 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 IPO4Q8TEX9 1081 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 DHX58Q96C10 678 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 TMEM87BQ96K49 555 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 SEC62Q99442 399 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 GOLPH3LQ9H4A5 285 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 EFCC1Q9HA90 598 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 MED4Q9NPJ6 270 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 A0A087WWV3 80 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 HSF2BPO75031 334 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 SASH1O94885 1247 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 ADKP55263 362 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 IRX5P78411 483 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 SLC39A6Q13433 755 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 SLC39A14Q15043 492 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 FMR1NBQ8N0W7 255 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 TRIML1Q8N9V2 468 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 FAM71BQ8TC56 605 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 LRRC59Q96AG4 307 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 RNF216Q9NWF9 866 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 KCNQ3O43525 872 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 WTAPQ15007 396 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 TICAM2Q86XR7 235 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 FAM114A1Q8IWE2 563 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 GPATCH11Q8N954 259 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 SMARCC2Q8TAQ2 1214 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 NDUFB9Q9Y6M9 179 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 CD163L1Q9NR16 1453 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 GOLGA6L7A0A1B0GV03 622 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 A6NNZ2 444 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 EYA2O00167 538 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 PPP6R2O75170 966 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 HSPD1P10809 573 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 STX17P56962 302 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 TUBB8Q3ZCM7 444 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 PARD6BQ9BYG5 372 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 DBNLQ9UJU6 430 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 CDC23Q9UJX2 597 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 GUCA1BQ9UMX6 200 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 RRP15Q9Y3B9 282 aaKnown RBP7.56□□□□□ -1.2
CPNE3-203ENST00000517490 SH3TC1Q8TE82 1336 aa7.56□□□□□ -1.2
CPNE3-203ENST00000517490 RFX7Q2KHR2 1363 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ERLIN2O94905 339 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 UQCRFS1P1P0C7P4 283 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 EPS15P42566 896 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 APPBP2Q92624 585 aa7.55□□□□□ -1.2
CPNE3-203ENST00000517490 ARHGEF28Q8N1W1 1705 aaKnown RBP7.55□□□□□ -1.2
CPNE3-203ENST00000517490 HMGB1P1B2RPK0 211 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-203ENST00000517490 POLR2DO15514 142 aaKnown RBP7.55□□□□□ -1.2
CPNE3-203ENST00000517490 TIMM10P62072 90 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms