RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 KANK3Q6NY19 840 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 ELMSAN1Q6PJG2 1045 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 ZNF662Q6ZS27 426 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 HFE2Q6ZVN8 426 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 CPLX3Q8WVH0 158 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 ANAPC16Q96DE5 110 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 SRPK1Q96SB4 655 aaKnown RBP4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 SMG9Q9H0W8 520 aaKnown RBP4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 OSGEPQ9NPF4 335 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 MBIPQ9NS73 344 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 ACTR10Q9NZ32 417 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 GMPR2Q9P2T1 348 aaKnown RBP4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 TRIM33Q9UPN9 1127 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 SYNGAP1Q96PV0 1343 aa4.92□□□□□ -1.62
RNU6-840P-201ENST00000517275 SBNO2Q9Y2G9 1366 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 GPR25O00155 361 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 CDC27P30260 824 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 PCBP4P57723 403 aaKnown RBP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 CABP4P57796 275 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 HNRNPUQ00839 825 aaKnown RBP eCLIP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 IKBKEQ14164 716 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 C20orf204Q6ZNR8 217 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 ILDR2Q71H61 639 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 RNPC3Q96LT9 517 aaKnown RBP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 FERD3LQ96RJ6 166 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 BRMS1Q9HCU9 246 aa4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 GDF2Q9UK05 429 aaPredicted RBP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 NSFL1CQ9UNZ2 370 aaKnown RBP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 POLR3KQ9Y2Y1 108 aaPredicted RBP4.91□□□□□ -1.62
RNU6-840P-201ENST00000517275 CDC14CA4D256 554 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 FAM177BA6PVY3 158 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 GFRA2O00451 464 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 TM4SF5O14894 197 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 TLR3O15455 904 aaKnown RBP4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 SNRPBP14678 240 aaKnown RBP4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 CLCQ05315 142 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 PSAPL1Q6NUJ1 521 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 CCDC81Q6ZN84 652 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 MICALL1Q8N3F8 863 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 CELF2-AS1Q8N7Q2 184 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 GOLGA6L1Q8N7Z2 621 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 GRIN3AQ8TCU5 1115 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 PRDM6Q9NQX0 595 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 TMEM260Q9NX78 707 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 MAPK8IP1Q9UQF2 711 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 R3HCC1Q9Y3T6 440 aaKnown RBP4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 PRKAB1Q9Y478 270 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 SNCAIPQ9Y6H5 919 aa4.9□□□□□ -1.63
RNU6-840P-201ENST00000517275 FAM221BA6H8Z2 402 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 SOX1O00570 391 aaPredicted RBP4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 PDPK1O15530 556 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 CYP11A1P05108 521 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 BAG6P46379 1132 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 FXNQ16595 210 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 KIAA0907Q7Z7F0 614 aaPredicted RBP4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 VWA5B2Q8N398 1253 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 ST13P5Q8NFI4 369 aaPredicted RBP4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 TMEM40Q8WWA1 233 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 KCNB2Q92953 911 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 CRBNQ96SW2 442 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 LRRC4BQ9NT99 713 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 STARD13Q9Y3M8 1113 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 SLC12A7Q9Y666 1083 aa4.89□□□□□ -1.63
RNU6-840P-201ENST00000517275 TNFRSF10CO14798 259 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 CLSTN1O94985 981 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 ZNF157P51786 506 aaPredicted RBP4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 PTPN11Q06124 597 aaPredicted RBP4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 C19orf57Q0VDD7 668 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 KIF4BQ2VIQ3 1234 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 ARSHQ5FYA8 562 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 TMEM201Q5SNT2 666 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 HP1BP3Q5SSJ5 553 aaPredicted RBP4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 GK5Q6ZS86 529 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 MAP4K3Q8IVH8 894 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 GMIPQ9P107 970 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 ADAM30Q9UKF2 790 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 PCDHB14Q9Y5E9 798 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 PCDHGC5Q9Y5F6 944 aa4.88□□□□□ -1.63
RNU6-840P-201ENST00000517275 NEURL1BA8MQ27 555 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 UPK3BL1B0FP48 263 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 UPK3BL2E5RIL1 263 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 H3BM21 787 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 PPM1GO15355 546 aaPredicted RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 RGS9O75916 674 aaPredicted RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 HTR3BO95264 441 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 EPXP11678 715 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 GUCY2CP25092 1073 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 MCM4P33991 863 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 RING1Q06587 406 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 TBC1D8BQ0IIM8 1120 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 IFRD2Q12894 506 aaPredicted RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 C2orf27AQ580R0 203 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 CDCP2Q5VXM1 449 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 INTS3Q68E01 1043 aaKnown RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 SYNPOQ8N3V7 929 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 KLHL23Q8NBE8 558 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms