RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IP6K1Q92551 441 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 PRKAG3Q9UGI9 489 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 ATP11BQ9Y2G3 1177 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 SPTAN1Q13813 2472 aaKnown RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 TRIM43BA6NCK2 446 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 TCERG1O14776 1098 aaKnown RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 KCNA4P22459 653 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 RPS12P25398 132 aaKnown RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 FCGRTP55899 365 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 ZXDAP98168 799 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 PUS10Q3MIT2 529 aaKnown RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 PPP2R2DQ66LE6 453 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 C19orf48Q6RUI8 117 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 SH3RF1Q7Z6J0 888 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 CYP2W1Q8TAV3 490 aa4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 TRIM43Q96BQ3 446 aaPredicted RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 HMX1Q9NP08 348 aaPredicted RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 DSPP15924 2871 aaKnown RBP4.78□□□□□ -1.64
SCARNA13-201ENST00000516672 TMEM8BA6NDV4 472 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 PRR5-ARHGAP8B1AHC4 643 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 MAFO75444 373 aaPredicted RBP4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 C1QL1O75973 258 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 HOXA10P31260 410 aaPredicted RBP4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 ARHGAP8P85298 464 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 NBPF6Q5VWK0 638 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 ASIC4Q96FT7 647 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 NBPF4Q96M43 638 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 SETDB2Q96T68 719 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 PDLIM7Q9NR12 457 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 ADAMTS20P59510 1910 aa4.77□□□□□ -1.65
SCARNA13-201ENST00000516672 PDGFBP01127 241 aaPredicted RBP4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 ZNF200P98182 395 aaPredicted RBP4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 FPGSQ05932 587 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 SIGLEC14Q08ET2 396 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 KIAA2012Q0VF49 1180 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 TRIM32Q13049 653 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 IRF5Q13568 498 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 TMEM105Q8N8V8 129 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 HAUS7Q99871 368 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 SEMA4AQ9H3S1 761 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 CABP1Q9NZU7 370 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 PCDHGC5Q9Y5F6 944 aa4.76□□□□□ -1.65
SCARNA13-201ENST00000516672 SALL1Q9NSC2 1324 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 LAMA5O15230 3695 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 NCAPD2Q15021 1401 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 EPOPA6NHQ4 379 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 MKRN4PQ13434 485 aaPredicted RBP4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 N4BP2L1Q5TBK1 243 aaPredicted RBP4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 SUPT20HQ8NEM7 779 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 SPIRE2Q8WWL2 714 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 ZCCHC14Q8WYQ9 949 aaKnown RBP4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 OPTNQ96CV9 577 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 CERS4Q9HA82 394 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 FREM2Q5SZK8 3169 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 RALGAPA2Q2PPJ7 1873 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 LRRC37AA6NMS7 1700 aa4.75□□□□□ -1.65
SCARNA13-201ENST00000516672 POLQO75417 2590 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 NBPF19A0A087WUL8 3843 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 HMGCRP04035 888 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 VASPP50552 380 aaPredicted RBP4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 GTF2A2P52657 109 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 KCNC4Q03721 635 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 RRP1BQ14684 758 aaKnown RBP4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 COL28A1Q2UY09 1125 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 TMEM121BQ9BXQ6 578 aaPredicted RBP4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 ELP3Q9H9T3 547 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 ZBTB1Q9Y2K1 713 aa4.74□□□□□ -1.65
SCARNA13-201ENST00000516672 GBF1Q92538 1859 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 BTBD19C9JJ37 291 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 H3BQ06 376 aaPredicted RBP4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 MYOGP15173 224 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 LMNB2Q03252 620 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 RASIP1Q5U651 963 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 NBPF5PQ86XG9 351 aaPredicted RBP4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 DNAJC10Q8IXB1 793 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 RTFDC1Q9BY42 306 aaPredicted RBP4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 KCNQ5Q9NR82 932 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 KCNH4Q9UQ05 1017 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 FAM50BQ9Y247 325 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 GPSM3Q9Y4H4 160 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 R4GN57 208 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 ROCK1Q13464 1354 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 SPTA1P02549 2419 aa4.73□□□□□ -1.65
SCARNA13-201ENST00000516672 TNKSO95271 1327 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 CELSR3Q9NYQ7 3312 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 UNCXA6NJT0 531 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 NBPF26B4DH59 902 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 PPP1R12BO60237 982 aaPredicted RBP4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 RABGGTBP53611 331 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 ZNF280AP59817 542 aaPredicted RBP4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 TRIM60Q495X7 471 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 NEK9Q8TD19 979 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 POP1Q99575 1024 aaKnown RBP4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 ZCCHC17Q9NP64 241 aaKnown RBP4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 MYOZ2Q9NPC6 264 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 PAXBP1Q9Y5B6 917 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 MGAMO43451 1857 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms