RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 KRTAP4-11Q9BYQ6 195 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ADAMTS10Q9H324 1103 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TUT1Q9H6E5 874 aaKnown RBP0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 LIN7BQ9HAP6 207 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 SP110Q9HB58 689 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ATP13A1Q9HD20 1204 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ABCB6Q9NP58 842 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 SEC31BQ9NQW1 1179 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PRDM6Q9NQX0 595 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FBLN5Q9UBX5 448 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 NSFL1CQ9UNZ2 370 aaKnown RBP0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 AKAP2Q9Y2D5 859 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 HIF3AQ9Y2N7 669 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PCDHGC5Q9Y5F6 944 aa0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ACIN1Q9UKV3 1341 aaKnown RBP0.81□□□□□ -2.28
RNU6-1049P-201ENST00000516414 COL17A1Q9UMD9 1497 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FAM95CA0A1B0GW59 222 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MINDY4BA8MYZ0 360 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 M0R2N6 131 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MEIS1O00470 390 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ENC1O14682 589 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TLR3O15455 904 aaKnown RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ICMTO60725 284 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PHACTR2O75167 634 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CBX7O95931 251 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 EOMESO95936 686 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 H2AFB1P0C5Y9 115 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 H2AFB2P0C5Z0 115 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 C1QTNF9P0C862 333 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ADH5P11766 374 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CFPP27918 469 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ATP1A2P50993 1020 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 OXCT1P55809 520 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 RAC1P63000 192 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 JAG1P78504 1218 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FGD1P98174 961 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FAM160A1Q05DH4 1040 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MESP2Q0VG99 397 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 HYAL2Q12891 473 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 LAMC2Q13753 1193 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 LRP8Q14114 963 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 IKBKEQ14164 716 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 LBRQ14739 615 aaKnown RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ZNF792Q3KQV3 632 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ZC3H12AQ5D1E8 599 aaKnown RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PHF19Q5T6S3 580 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 RNF43Q68DV7 783 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 SPOCD1Q6ZMY3 1216 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 BNC2Q6ZN30 1099 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 RUFY4Q6ZNE9 571 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 NBPF11Q86T75 865 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 GGNQ86UU5 652 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TXNDC2Q86VQ3 553 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 C1QL4Q86Z23 238 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CCNJLQ8IV13 435 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TP53INP2Q8IXH6 220 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TMEM130Q8N3G9 435 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 STAG2Q8N3U4 1231 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TOP6BLQ8N6T0 577 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 C3orf58Q8NDZ4 430 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 C1orf216Q8TAB5 229 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CCER1Q8TC90 406 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PIK3R5Q8WYR1 880 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CLP1Q92989 425 aaKnown RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 VTI1AQ96AJ9 217 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 SIRT1Q96EB6 747 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 Q96M66 194 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 DIRC2Q96SL1 478 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 KRTAP9-3Q9BYQ3 159 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 BCO2Q9BYV7 579 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ACSS3Q9H6R3 686 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 EPB41L4AQ9HCS5 686 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ANKIB1Q9P2G1 1089 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 RNF112Q9ULX5 631 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 AP4E1Q9UPM8 1137 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 RNF114Q9Y508 228 aa0.8□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PNMA6FA0A0J9YX94 578 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MYOCOSA0A1B0GUC4 107 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TMEM238LA0A1B0GVL6 79 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 H3BRJ5 948 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 H3BS24 57 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CYP26A1O43174 497 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FOXO3O43524 673 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PSPNO60542 156 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 GADD45BO75293 160 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 ESR1P03372 595 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 P4HBP07237 508 aaKnown RBP0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MSL3P1P0C860 447 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 TFE3P19532 575 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MZF1P28698 734 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MAPK8P45983 427 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 CRKP46108 304 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 USP11P51784 963 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 HK2P52789 917 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 EPHB3P54753 998 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 MCCD1P59942 119 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FKBP4Q02790 459 aaKnown RBP eCLIP0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 C19orf57Q0VDD7 668 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 FZD5Q13467 585 aa0.79□□□□□ -2.28
RNU6-1049P-201ENST00000516414 PDE3AQ14432 1141 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms