RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	FGA	P02671	866 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	HMGB1	P09429	215 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	HOXA10	P31260	410 aa	Predicted RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	GYG1	P46976	350 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ST5	P78524	1137 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	EXOSC10	Q01780	885 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	MAP3K12	Q12852	859 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	COL9A3	Q14050	684 aa	Predicted RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TOB2	Q14106	344 aa	Predicted RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ALX1	Q15699	326 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	C15orf52	Q6ZUT6	534 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	STOX1	Q6ZVD7	989 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	NOL8	Q76FK4	1167 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	COL23A1	Q86Y22	540 aa	Predicted RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	NLGN1	Q8N2Q7	840 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	FBXO41	Q8TF61	875 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	MS4A4A	Q96JQ5	239 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	STRBP	Q96SI9	672 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	KRTAP4-8	Q9BYQ9	185 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CRISPLD2	Q9H0B8	497 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SH2B1	Q9NRF2	756 aa	Predicted RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	GNL3L	Q9NVN8	582 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TFCP2L1	Q9NZI6	479 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	DENND2A	Q9ULE3	1009 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	LEMD3	Q9Y2U8	911 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZDHHC9	Q9Y397	364 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854		A0A1B0GUL6	1792 aa		5.34	□□□□□ -1.56
ATP2C1-223	ENST00000515854	ZMYM6	O95789	1325 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PNPLA7	Q6ZV29	1317 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854		A0A0G2JLW4	131 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TESPA1	A2RU30	521 aa	Predicted RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PATL2	C9JE40	543 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854		E7EWF7	191 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	NPHP1	O15259	732 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	BBOX1	O75936	387 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	LARGE1	O95461	756 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	BRD1	O95696	1058 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	KLRK1	P26718	216 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	HIBADH	P31937	336 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	INSM1	Q01101	510 aa	Predicted RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	ST3GAL1	Q11201	340 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	ME3	Q16798	604 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	IMMT	Q16891	758 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TMEM132A	Q24JP5	1023 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TTLL5	Q6EMB2	1281 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TMED8	Q6PL24	325 aa	Predicted RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	DHX32	Q7L7V1	743 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	FBXL16	Q8N461	479 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	MAGEB6	Q8N7X4	407 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	RPGR	Q92834	1020 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	RBM17	Q96I25	401 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	GBP4	Q96PP9	640 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	CRAMP1	Q96RY5	1269 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	BRIP1	Q9BX63	1249 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	AGXT2	Q9BYV1	514 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TPCN1	Q9ULQ1	816 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	RGPD3	A6NKT7	1758 aa	Predicted RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	RGPD4	Q7Z3J3	1758 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	CASZ1	Q86V15	1759 aa		5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TNS1	Q9HBL0	1735 aa	Known RBP	5.33	□□□□□ -1.56
ATP2C1-223	ENST00000515854	COL1A1	P02452	1464 aa	Predicted RBP	5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	DOCK2	Q92608	1830 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	XDH	P47989	1333 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	DDX11L8	A8MPP1	907 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TULP1	O00294	542 aa	Predicted RBP	5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	ZNF213	O14771	459 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	BAG4	O95429	457 aa	Known RBP	5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	GNAT2	P19087	354 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PTMS	P20962	102 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	ATP2B4	P23634	1241 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	GPSM2	P81274	684 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	CAMK2B	Q13554	666 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PKP1	Q13835	747 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854		Q6ZUG5	572 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TMC4	Q7Z404	712 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TXNRD3	Q86VQ6	643 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	VPS37D	Q86XT2	251 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	CCDC83	Q8IWF9	413 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	IFNL3	Q8IZI9	196 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TDRD7	Q8NHU6	1098 aa	Known RBP	5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	AIDA	Q96BJ3	306 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TCEANC2	Q96MN5	208 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	CAMKK2	Q96RR4	588 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	LARP6	Q9BRS8	491 aa	Known RBP	5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PODXL2	Q9NZ53	605 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	LRP2BP	Q9P2M1	347 aa		5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.32	□□□□□ -1.56
ATP2C1-223	ENST00000515854	NRXN2	Q9P2S2	1712 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	WDR19	Q8NEZ3	1342 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	SALL1	Q9NSC2	1324 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	TAF1	P21675	1872 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	GSG1L2	A8MUP6	293 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PFKFB2	O60825	505 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	MBD4	O95243	580 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	SRGN	P10124	158 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	PDIA4	P13667	645 aa	Known RBP	5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	CYP7A1	P22680	504 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	EVC	P57679	992 aa		5.31	□□□□□ -1.56
ATP2C1-223	ENST00000515854	SLC15A2	Q16348	729 aa		5.31	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms