RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 EVCP57679 992 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 UTP14CQ5TAP6 766 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 DHX58Q96C10 678 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 PPP1R13BQ96KQ4 1090 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 SLC5A1P13866 664 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 DHX40Q8IX18 779 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 FMR1NBQ8N0W7 255 aaPredicted RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 PUS7LQ9H0K6 701 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 GOLGA6L9A6NEM1 432 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 POLR2DO15514 142 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 ITGA6P23229 1130 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 RBM6P78332 1123 aaKnown RBP11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 LZTFL1Q9NQ48 299 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 FANCLQ9NW38 375 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
SH3TC2-215ENST00000515425 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 CTDNEP1O95476 244 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 TUBB4AP04350 444 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 ETF1P62495 437 aaKnown RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 ASAP1Q9ULH1 1129 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 SLC4A4Q9Y6R1 1079 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 KIF23Q02241 960 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 DDB1Q16531 1140 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 SKIDA1Q1XH10 827 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 FBXO38Q6PIJ6 1188 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 DIS3L2Q8IYB7 885 aaKnown RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 ANKRD7Q92527 254 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 NCAPD2Q15021 1401 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 SLIT1O75093 1534 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 UTYO14607 1347 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 MBD4O95243 580 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 MIGA1Q8NAN2 632 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 AK7Q96M32 723 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 SRRTQ9BXP5 876 aaKnown RBP11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 GPR108Q9NPR9 543 aa11.65□□□□□ -0.54
SH3TC2-215ENST00000515425 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 H7C1W4 665 aa11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 CTIFO43310 598 aaKnown RBP11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 CTDSPL2Q05D32 466 aa11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 SYCP1Q15431 976 aa11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 ZNF827Q17R98 1081 aa11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 ARFGAP3Q9NP61 516 aa11.65□□□□□ -0.55
SH3TC2-215ENST00000515425 CUTAO60888 179 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 ERLIN1O75477 346 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 IGHMBP2P38935 993 aaKnown RBP11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 TXLNAP40222 546 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 ADKP55263 362 aaKnown RBP11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 EXOSC10Q01780 885 aaKnown RBP11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 SLC39A14Q15043 492 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 CALCOCO1Q9P1Z2 691 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 JAKMIP3Q5VZ66 844 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 CMTR1Q8N1G2 835 aaKnown RBP11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 KRT23Q9C075 422 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 CABP5Q9NP86 173 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 PCDHA5Q9Y5H7 936 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 MON2Q7Z3U7 1717 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 TCIRG1Q13488 830 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
SH3TC2-215ENST00000515425 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 RBM43Q6ZSC3 357 aaKnown RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 PUF60Q9UHX1 559 aaKnown RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 CCZ1BP86790 482 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 CCZ1P86791 482 aaPredicted RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 ATG9AQ7Z3C6 839 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 ACBD3Q9H3P7 528 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 PCDH11XQ9BZA7 1347 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 PCDH11YQ9BZA8 1340 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 BTBD18B2RXH4 712 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 N4BP3O15049 544 aa11.63□□□□□ -0.55
SH3TC2-215ENST00000515425 ARHGAP6O43182 974 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms