RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 EVX2Q03828 476 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 CCDC83Q8IWF9 413 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 BRF1Q92994 677 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 C10orf71Q711Q0 1435 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 ZBTB22O15209 634 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 HMGB1P09429 215 aaKnown RBP10.85□□□□□ -0.67
CPNE4-213ENST00000515418 FGD1P98174 961 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 ST3GAL1Q11201 340 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 AOC3Q16853 763 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 CERS5Q8N5B7 392 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 MTFR1LQ9H019 292 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
CPNE4-213ENST00000515418 B4E1Z4 1266 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 ANTXR2P58335 489 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 APOBRQ0VD83 1088 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 NCOA7Q8NI08 942 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 SH3RF3Q8TEJ3 882 aaPredicted RBP10.84□□□□□ -0.67
CPNE4-213ENST00000515418 ZSCAN31Q96LW9 406 aaPredicted RBP10.84□□□□□ -0.67
CPNE4-213ENST00000515418 EYA3Q99504 573 aa10.84□□□□□ -0.67
CPNE4-213ENST00000515418 NEDD4P46934 1319 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 FAM205AQ6ZU69 1335 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 PRC1O43663 620 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 POLD1P28340 1107 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 ANKRD1Q15327 319 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 CYB5R4Q7L1T6 521 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 MB21D2Q8IYB1 491 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 RTFDC1Q9BY42 306 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 CWC22Q9HCG8 908 aaKnown RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 USP17L12C9JPN9 530 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 USP17L21D6R901 530 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 MCM5P33992 734 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 RRP12Q5JTH9 1297 aaKnown RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 TNPO1Q92973 898 aaKnown RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 ZSWIM5Q9P217 1185 aa10.83□□□□□ -0.68
CPNE4-213ENST00000515418 NAP1L2Q9ULW6 460 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-213ENST00000515418 ECE2O60344 883 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 CYP2D6P10635 497 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 SCNN1DP51172 638 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 GSTO1P78417 241 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 PPARAQ07869 468 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 TRDNQ13061 729 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 AKNAD1Q5T1N1 836 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 MFSD6Q6ZSS7 791 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 TBC1D22AQ8WUA7 517 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 ANP32EQ9BTT0 268 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 CRNKL1Q9BZJ0 848 aaKnown RBP10.82□□□□□ -0.68
CPNE4-213ENST00000515418 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
CPNE4-213ENST00000515418 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
CPNE4-213ENST00000515418 TOMM22Q9NS69 142 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
CPNE4-213ENST00000515418 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 SCN9AQ15858 1988 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 ZMYM6O95789 1325 aa10.82□□□□□ -0.68
CPNE4-213ENST00000515418 KDM4AO75164 1064 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 LDHCP07864 332 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 BTDP43251 543 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 CCT2P78371 535 aaKnown RBP10.81□□□□□ -0.68
CPNE4-213ENST00000515418 RAB3GAP1Q15042 981 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 PODNQ7Z5L7 613 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 RAB11FIP4Q86YS3 637 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 TGFBRAP1Q8WUH2 860 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 PIM2Q9P1W9 311 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 PPIP5K2O43314 1243 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 PPFIA3O75145 1194 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 PRDM1O75626 825 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 BAG3O95817 575 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 USP17L8P0C7I0 530 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 ZKSCAN3Q9BRR0 538 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 ZNF277Q9NRM2 450 aaPredicted RBP10.81□□□□□ -0.68
CPNE4-213ENST00000515418 MCM9Q9NXL9 1143 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 BRPF3Q9ULD4 1205 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 TTF2Q9UNY4 1162 aaKnown RBP10.81□□□□□ -0.68
CPNE4-213ENST00000515418 SMC3Q9UQE7 1217 aa10.81□□□□□ -0.68
CPNE4-213ENST00000515418 SNED1Q8TER0 1413 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 GPR75-ASB3A0A0A6YYF3 556 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 GJB2P29033 226 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 PDIA3P30101 505 aaKnown RBP10.8□□□□□ -0.68
CPNE4-213ENST00000515418 PTGER2P43116 358 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 USP5P45974 858 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 PPP4CP60510 307 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 TGFB2P61812 414 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 KIAA2012Q0VF49 1180 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 MAPKAPK5Q8IW41 473 aa10.8□□□□□ -0.68
CPNE4-213ENST00000515418 NCOA5Q9HCD5 579 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms