RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TMOD2Q9NZR1 351 aa14.14□□□□□ -0.15
VCAN-212ENST00000515397 DBNLQ9UJU6 430 aaKnown RBP14.14□□□□□ -0.15
VCAN-212ENST00000515397 NDUFB9Q9Y6M9 179 aa14.14□□□□□ -0.15
VCAN-212ENST00000515397 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
VCAN-212ENST00000515397 SLURP2P0DP57 97 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 ARID4AP29374 1257 aaPredicted RBP14.13□□□□□ -0.15
VCAN-212ENST00000515397 TNNI2P48788 182 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 ERICH6Q7L0X2 663 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 GPR108Q9NPR9 543 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 PAPPA2Q9BXP8 1791 aa14.13□□□□□ -0.15
VCAN-212ENST00000515397 GJA5P36382 358 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 ZAP70P43403 619 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 IREB2P48200 963 aaKnown RBP14.12□□□□□ -0.15
VCAN-212ENST00000515397 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 CCDC158Q5M9N0 1113 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 SPRYD7Q5W111 196 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 AACSQ86V21 672 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.12□□□□□ -0.15
VCAN-212ENST00000515397 ELP3Q9H9T3 547 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 PRDM10Q9NQV6 1147 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 FAM198AQ9UFP1 575 aa14.12□□□□□ -0.15
VCAN-212ENST00000515397 TBC1D8O95759 1140 aa14.11□□□□□ -0.15
VCAN-212ENST00000515397 CYP2E1P05181 493 aaPredicted RBP14.11□□□□□ -0.15
VCAN-212ENST00000515397 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
VCAN-212ENST00000515397 BTDP43251 543 aa14.11□□□□□ -0.15
VCAN-212ENST00000515397 MAP3K11Q16584 847 aa14.11□□□□□ -0.15
VCAN-212ENST00000515397 SPTY2D1Q68D10 685 aaPredicted RBP14.11□□□□□ -0.15
VCAN-212ENST00000515397 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
VCAN-212ENST00000515397 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
VCAN-212ENST00000515397 RHPN1Q8TCX5 695 aa14.11□□□□□ -0.15
VCAN-212ENST00000515397 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
VCAN-212ENST00000515397 MAP3K9P80192 1104 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 PICALMQ13492 652 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.1□□□□□ -0.15
VCAN-212ENST00000515397 FAM83AQ86UY5 434 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 ZKSCAN4Q969J2 545 aaPredicted RBP14.1□□□□□ -0.15
VCAN-212ENST00000515397 NSUN4Q96CB9 384 aaKnown RBP14.1□□□□□ -0.15
VCAN-212ENST00000515397 WNK4Q96J92 1243 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 R3HDMLQ9H3Y0 253 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 DDX4Q9NQI0 724 aaKnown RBP14.1□□□□□ -0.15
VCAN-212ENST00000515397 PIH1D3Q9NQM4 214 aaKnown RBP14.1□□□□□ -0.15
VCAN-212ENST00000515397 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
VCAN-212ENST00000515397 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
VCAN-212ENST00000515397 RGS3P49796 1198 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 FKBP1CQ5VVH2 108 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 SH3BP5LQ7L8J4 393 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 ANTXR1Q9H6X2 564 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 MYH13Q9UKX3 1938 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 MROH7-TTC4A0A0A0MT08 1334 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 GAKO14976 1311 aa14.09□□□□□ -0.15
VCAN-212ENST00000515397 PDS5AQ29RF7 1337 aaKnown RBP14.09□□□□□ -0.15
VCAN-212ENST00000515397 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.15
VCAN-212ENST00000515397 HMMRO75330 724 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 WDHD1O75717 1129 aaPredicted RBP14.08□□□□□ -0.16
VCAN-212ENST00000515397 INPP5BP32019 993 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 RHBDL3P58872 404 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 VGLL4Q14135 290 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 ERC1Q8IUD2 1116 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
VCAN-212ENST00000515397 OPTNQ96CV9 577 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 FAM163AQ96GL9 167 aaPredicted RBP14.08□□□□□ -0.16
VCAN-212ENST00000515397 WRNIP1Q96S55 665 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
VCAN-212ENST00000515397 CASP8AP2Q9UKL3 1982 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 GPR75-ASB3A0A0A6YYF3 556 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 DDTLA6NHG4 134 aaPredicted RBP14.07□□□□□ -0.16
VCAN-212ENST00000515397 ZBTB22O15209 634 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 CA12O43570 354 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 TM4SF4P48230 202 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 ADGRA1Q86SQ6 560 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 SLF2Q8IX21 1173 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.07□□□□□ -0.16
VCAN-212ENST00000515397 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
VCAN-212ENST00000515397 IGF2BP3O00425 579 aaKnown RBP eCLIP14.06□□□□□ -0.16
VCAN-212ENST00000515397 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
VCAN-212ENST00000515397 LDHCP07864 332 aa14.06□□□□□ -0.16
VCAN-212ENST00000515397 RRP1P56182 461 aaKnown RBP14.06□□□□□ -0.16
VCAN-212ENST00000515397 GSTO1P78417 241 aa14.06□□□□□ -0.16
VCAN-212ENST00000515397 HSP90AB4PQ58FF6 505 aa14.06□□□□□ -0.16
VCAN-212ENST00000515397 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
VCAN-212ENST00000515397 SH3RF3Q8TEJ3 882 aaPredicted RBP14.06□□□□□ -0.16
VCAN-212ENST00000515397 KIF1BPQ96EK5 621 aa14.06□□□□□ -0.16
VCAN-212ENST00000515397 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
VCAN-212ENST00000515397 AATFQ9NY61 560 aaKnown RBP eCLIP14.06□□□□□ -0.16
VCAN-212ENST00000515397 CSADQ9Y600 493 aa14.06□□□□□ -0.16
VCAN-212ENST00000515397 MYH2Q9UKX2 1941 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 FAM196BA6NMK8 535 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 IFIT2P09913 472 aaKnown RBP14.05□□□□□ -0.16
VCAN-212ENST00000515397 DYNLL1P63167 89 aaKnown RBP14.05□□□□□ -0.16
VCAN-212ENST00000515397 TEX11Q8IYF3 940 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 CLASRPQ8N2M8 674 aaKnown RBP14.05□□□□□ -0.16
VCAN-212ENST00000515397 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
VCAN-212ENST00000515397 ZNF512BQ96KM6 892 aaPredicted RBP14.05□□□□□ -0.16
VCAN-212ENST00000515397 CRBNQ96SW2 442 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 PTPN18Q99952 460 aa14.05□□□□□ -0.16
VCAN-212ENST00000515397 IDI2Q9BXS1 227 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms