RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 AP3B2Q13367 1082 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 RAB33AQ14088 237 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 SLCO4C1Q6ZQN7 724 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 REXO1Q8N1G1 1221 aaKnown RBP6.05□□□□□ -1.44
HERC6-208ENST00000515365 HNRNPLLQ8WVV9 542 aaKnown RBP6.05□□□□□ -1.44
HERC6-208ENST00000515365 CBX8Q9HC52 389 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 BRMS1Q9HCU9 246 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 CACNA2D2Q9NY47 1150 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 NXF1Q9UBU9 619 aaKnown RBP6.05□□□□□ -1.44
HERC6-208ENST00000515365 STARD13Q9Y3M8 1113 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 CCDC180Q9P1Z9 1646 aa6.05□□□□□ -1.44
HERC6-208ENST00000515365 TRIM37O94972 964 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 BPNT1O95861 308 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 GSTP1P09211 210 aaKnown RBP6.04□□□□□ -1.44
HERC6-208ENST00000515365 HMGB1P09429 215 aaKnown RBP6.04□□□□□ -1.44
HERC6-208ENST00000515365 HSP90B1P14625 803 aaKnown RBP6.04□□□□□ -1.44
HERC6-208ENST00000515365 ALAS2P22557 587 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 MCM4P33991 863 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 BAG6P46379 1132 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 GIPRP48546 466 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 RPL6Q02878 288 aaKnown RBP6.04□□□□□ -1.44
HERC6-208ENST00000515365 TNNI3KQ59H18 835 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 HGSNATQ68CP4 663 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 DIEXFQ68CQ4 756 aaKnown RBP6.04□□□□□ -1.44
HERC6-208ENST00000515365 KANK3Q6NY19 840 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 C20orf204Q6ZNR8 217 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 NPAS3Q8IXF0 933 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 GOLGA6L1Q8N7Z2 621 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 NUDT8Q8WV74 236 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 MRFAP1L1Q96HT8 127 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 FERD3LQ96RJ6 166 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 TRIM55Q9BYV6 548 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 IGF1RP08069 1367 aa6.04□□□□□ -1.44
HERC6-208ENST00000515365 H3BM21 787 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
HERC6-208ENST00000515365 VSIG8P0DPA2 414 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 EIF6P56537 245 aaKnown RBP6.03□□□□□ -1.44
HERC6-208ENST00000515365 CLCQ05315 142 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 SDE2Q6IQ49 451 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 MPRIPQ6WCQ1 1025 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 JAZF1Q86VZ6 243 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 NLGN1Q8N2Q7 840 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 IL22RA1Q8N6P7 574 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 FAM169BQ8N8A8 192 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 OR6P1Q8NGX9 317 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 NRSN2Q9GZP1 204 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 GDF2Q9UK05 429 aaPredicted RBP6.03□□□□□ -1.44
HERC6-208ENST00000515365 PPME1Q9Y570 386 aa6.03□□□□□ -1.44
HERC6-208ENST00000515365 EIF4EBP3O60516 100 aaPredicted RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 EPXP11678 715 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 IMPDH2P12268 514 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 AFF1P51825 1210 aaKnown RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 PIP4K2BP78356 416 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 GSTM4Q03013 218 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 RNFT1Q5M7Z0 435 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 MAP1SQ66K74 1059 aaPredicted RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 Q6ZNB5 142 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 GK5Q6ZS86 529 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 RBBP8NLQ8NC74 664 aaPredicted RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 WNT8BQ93098 351 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 EHMT1Q9H9B1 1298 aa6.02□□□□□ -1.45
HERC6-208ENST00000515365 JPH1Q9HDC5 661 aaPredicted RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 POLR3KQ9Y2Y1 108 aaPredicted RBP6.02□□□□□ -1.45
HERC6-208ENST00000515365 U2SURPO15042 1029 aaKnown RBP6.01□□□□□ -1.45
HERC6-208ENST00000515365 ATE1O95260 518 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 ALBP02768 609 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 SELPP16109 830 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 CDC25BP30305 580 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 C19orf57Q0VDD7 668 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 RASA3Q14644 834 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 FBXW10Q5XX13 1052 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 LRP10Q7Z4F1 713 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 LSRQ86X29 649 aaPredicted RBP6.01□□□□□ -1.45
HERC6-208ENST00000515365 SLC7A3Q8WY07 619 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 KCNB2Q92953 911 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 CRBNQ96SW2 442 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 COL25A1Q9BXS0 654 aaPredicted RBP6.01□□□□□ -1.45
HERC6-208ENST00000515365 OSGEPQ9NPF4 335 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 SNTG2Q9NY99 539 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 R3HCC1Q9Y3T6 440 aaKnown RBP6.01□□□□□ -1.45
HERC6-208ENST00000515365 PCDHB14Q9Y5E9 798 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 ADGRL1O94910 1474 aa6.01□□□□□ -1.45
HERC6-208ENST00000515365 LINC01387J3KSC0 135 aa6□□□□□ -1.45
HERC6-208ENST00000515365 GFRA2O00451 464 aa6□□□□□ -1.45
HERC6-208ENST00000515365 ECEL1O95672 775 aa6□□□□□ -1.45
HERC6-208ENST00000515365 CYP11A1P05108 521 aa6□□□□□ -1.45
HERC6-208ENST00000515365 CDK8P49336 464 aa6□□□□□ -1.45
HERC6-208ENST00000515365 ARL4DP49703 201 aa6□□□□□ -1.45
HERC6-208ENST00000515365 SRSF11Q05519 484 aaKnown RBP6□□□□□ -1.45
HERC6-208ENST00000515365 EGFLAMQ63HQ2 1017 aa6□□□□□ -1.45
HERC6-208ENST00000515365 FAM117BQ6P1L5 589 aa6□□□□□ -1.45
HERC6-208ENST00000515365 TXNDC11Q6PKC3 985 aa6□□□□□ -1.45
HERC6-208ENST00000515365 ZNF662Q6ZS27 426 aa6□□□□□ -1.45
HERC6-208ENST00000515365 CELF2-AS1Q8N7Q2 184 aa6□□□□□ -1.45
HERC6-208ENST00000515365 GPBAR1Q8TDU6 330 aa6□□□□□ -1.45
HERC6-208ENST00000515365 DEPDC7Q96QD5 511 aa6□□□□□ -1.45
HERC6-208ENST00000515365 SRPK1Q96SB4 655 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms