RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 IRS2Q9Y4H2 1338 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 NFKBIEO00221 500 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 GYG1P46976 350 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 BCAMP50895 628 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 ARHGAP27Q6ZUM4 889 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 C15orf52Q6ZUT6 534 aaKnown RBP17.23■□□□□ 0.35
APBB3-221ENST00000515056 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
APBB3-221ENST00000515056 ZNF609O15014 1411 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 EYA3Q99504 573 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
APBB3-221ENST00000515056 LTBP1Q14766 1721 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 ZNF589Q86UQ0 364 aaPredicted RBP17.22■□□□□ 0.35
APBB3-221ENST00000515056 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
APBB3-221ENST00000515056 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
APBB3-221ENST00000515056 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
APBB3-221ENST00000515056 HMGN5P82970 282 aaKnown RBP17.21■□□□□ 0.35
APBB3-221ENST00000515056 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
APBB3-221ENST00000515056 DUOX1Q9NRD9 1551 aa17.21■□□□□ 0.35
APBB3-221ENST00000515056 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
APBB3-221ENST00000515056 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
APBB3-221ENST00000515056 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
APBB3-221ENST00000515056 VPS37DQ86XT2 251 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 PHKA1P46020 1223 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 AOC3Q16853 763 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
APBB3-221ENST00000515056 TOB2Q14106 344 aaPredicted RBP17.19■□□□□ 0.34
APBB3-221ENST00000515056 LARP1BQ659C4 914 aaKnown RBP17.19■□□□□ 0.34
APBB3-221ENST00000515056 ZNF710Q8N1W2 664 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 LTBP3Q9NS15 1303 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 RASSF7Q02833 373 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 NECAB1Q8N987 351 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 ARID3AQ99856 593 aa17.19■□□□□ 0.34
APBB3-221ENST00000515056 GRIN3BO60391 1043 aa17.18■□□□□ 0.34
APBB3-221ENST00000515056 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
APBB3-221ENST00000515056 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
APBB3-221ENST00000515056 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
APBB3-221ENST00000515056 CD209Q9NNX6 404 aa17.18■□□□□ 0.34
APBB3-221ENST00000515056 HELLSQ9NRZ9 838 aa17.18■□□□□ 0.34
APBB3-221ENST00000515056 ELP1O95163 1332 aa17.18■□□□□ 0.34
APBB3-221ENST00000515056 G3V3G9 751 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 PRELPP51888 382 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
APBB3-221ENST00000515056 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 LARGE2Q8N3Y3 721 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 COA1Q9GZY4 146 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 IQSEC3Q9UPP2 1182 aaPredicted RBP17.17■□□□□ 0.34
APBB3-221ENST00000515056 FIBPO43427 364 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.17■□□□□ 0.34
APBB3-221ENST00000515056 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
APBB3-221ENST00000515056 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
APBB3-221ENST00000515056 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
APBB3-221ENST00000515056 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
APBB3-221ENST00000515056 KRT85P78386 507 aa17.16■□□□□ 0.34
APBB3-221ENST00000515056 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
APBB3-221ENST00000515056 TMEM51Q9NW97 253 aa17.16■□□□□ 0.34
APBB3-221ENST00000515056 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
APBB3-221ENST00000515056 IL1R1P14778 569 aa17.16■□□□□ 0.34
APBB3-221ENST00000515056 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
APBB3-221ENST00000515056 SCARF1Q14162 830 aa17.16■□□□□ 0.34
APBB3-221ENST00000515056 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
APBB3-221ENST00000515056 RNF214Q8ND24 703 aa17.16■□□□□ 0.34
APBB3-221ENST00000515056 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
APBB3-221ENST00000515056 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
APBB3-221ENST00000515056 CBX1P83916 185 aa17.15■□□□□ 0.34
APBB3-221ENST00000515056 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
APBB3-221ENST00000515056 NAP1L2Q9ULW6 460 aaPredicted RBP17.15■□□□□ 0.34
APBB3-221ENST00000515056 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
APBB3-221ENST00000515056 LMNB1P20700 586 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 MCAMP43121 646 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 KCNQ5Q9NR82 932 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 PAG1Q9NWQ8 432 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 ECE2O60344 883 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 RASGRF1Q13972 1273 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
APBB3-221ENST00000515056 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
APBB3-221ENST00000515056 JDP2Q8WYK2 163 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 GTF3C6Q969F1 213 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
APBB3-221ENST00000515056 SCAND2PQ9GZW5 306 aaPredicted RBP17.14■□□□□ 0.33
APBB3-221ENST00000515056 CYP21A2P08686 494 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 CCDC88AQ3V6T2 1871 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 ZMYM1Q5SVZ6 1142 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms