RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 TRPA1O75762 1119 aa10.78□□□□□ -0.68
HERC4-214ENST00000513996 LDHBP07195 334 aaKnown RBP10.78□□□□□ -0.68
HERC4-214ENST00000513996 MVPQ14764 893 aaKnown RBP10.78□□□□□ -0.68
HERC4-214ENST00000513996 CDC42EP5Q6NZY7 148 aa10.78□□□□□ -0.68
HERC4-214ENST00000513996 ZNF384Q8TF68 577 aa10.78□□□□□ -0.68
HERC4-214ENST00000513996 HMG20BQ9P0W2 317 aa10.78□□□□□ -0.68
HERC4-214ENST00000513996 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
HERC4-214ENST00000513996 MAST3O60307 1309 aa10.78□□□□□ -0.68
HERC4-214ENST00000513996 GJA5P36382 358 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 MCAMP43121 646 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 NFIAQ12857 509 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 TNFAIP1Q13829 316 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 TNNI3KQ59H18 835 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 SPRYD7Q5W111 196 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 TBC1D9Q6ZT07 1266 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 SIRT2Q8IXJ6 389 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 SLC10A4Q96EP9 437 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 DBNDD2Q9BQY9 259 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 GPR108Q9NPR9 543 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 FPGT-TNNI3KV9GXZ4 949 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 ARAP2Q8WZ64 1704 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 PDS5AQ29RF7 1337 aaKnown RBP10.77□□□□□ -0.69
HERC4-214ENST00000513996 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
HERC4-214ENST00000513996 CA12O43570 354 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 MS4A1P11836 297 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 ARID4AP29374 1257 aaPredicted RBP10.76□□□□□ -0.69
HERC4-214ENST00000513996 TM4SF4P48230 202 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 OS9Q13438 667 aaPredicted RBP10.76□□□□□ -0.69
HERC4-214ENST00000513996 GORABQ5T7V8 394 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 FKBP1CQ5VVH2 108 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.76□□□□□ -0.69
HERC4-214ENST00000513996 FAM83AQ86UY5 434 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 ZFPM1Q8IX07 1006 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
HERC4-214ENST00000513996 WNK4Q96J92 1243 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 USP40Q9NVE5 1235 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 TLR7Q9NYK1 1049 aaKnown RBP10.76□□□□□ -0.69
HERC4-214ENST00000513996 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 ABCF2Q9UG63 623 aa10.76□□□□□ -0.69
HERC4-214ENST00000513996 IREB2P48200 963 aaKnown RBP10.75□□□□□ -0.69
HERC4-214ENST00000513996 TNNI2P48788 182 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 MECOMQ03112 1051 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 TCP10Q12799 353 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 SPATA5Q8NB90 893 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 FAM163AQ96GL9 167 aaPredicted RBP10.75□□□□□ -0.69
HERC4-214ENST00000513996 CCDC8Q9H0W5 538 aaPredicted RBP10.75□□□□□ -0.69
HERC4-214ENST00000513996 R3HDMLQ9H3Y0 253 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
HERC4-214ENST00000513996 DDX19BQ9UMR2 479 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 EXOC6BQ9Y2D4 811 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 CASP8AP2Q9UKL3 1982 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 GAKO14976 1311 aa10.75□□□□□ -0.69
HERC4-214ENST00000513996 UQCRFS1P1P0C7P4 283 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 MIGA2Q7L4E1 593 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 ANKRD13AQ8IZ07 590 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 ZGPATQ8N5A5 531 aaKnown RBP10.74□□□□□ -0.69
HERC4-214ENST00000513996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.74□□□□□ -0.69
HERC4-214ENST00000513996 FAM151AQ8WW52 585 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 ELP3Q9H9T3 547 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 SAGE1Q9NXZ1 904 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
HERC4-214ENST00000513996 GPR75-ASB3A0A0A6YYF3 556 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 UNCXA6NJT0 531 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 TBC1D8O95759 1140 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 SLURP2P0DP57 97 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 RHBDL3P58872 404 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 MAP3K9P80192 1104 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 PDE3AQ14432 1141 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 SPTY2D1Q68D10 685 aaPredicted RBP10.73□□□□□ -0.69
HERC4-214ENST00000513996 SH3BP5LQ7L8J4 393 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
HERC4-214ENST00000513996 RPAP2Q8IXW5 612 aaPredicted RBP10.73□□□□□ -0.69
HERC4-214ENST00000513996 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
HERC4-214ENST00000513996 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
HERC4-214ENST00000513996 MYH13Q9UKX3 1938 aa10.73□□□□□ -0.69
HERC4-214ENST00000513996 WDHD1O75717 1129 aaPredicted RBP10.72□□□□□ -0.69
HERC4-214ENST00000513996 CYP2E1P05181 493 aaPredicted RBP10.72□□□□□ -0.69
HERC4-214ENST00000513996 BTDP43251 543 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 ZAP70P43403 619 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 RGS3P49796 1198 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 VGLL4Q14135 290 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 TTC39AQ5SRH9 613 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 ZKSCAN4Q969J2 545 aaPredicted RBP10.72□□□□□ -0.69
HERC4-214ENST00000513996 OPTNQ96CV9 577 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 ZNF512BQ96KM6 892 aaPredicted RBP10.72□□□□□ -0.69
HERC4-214ENST00000513996 PTPN18Q99952 460 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 IDI2Q9BXS1 227 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 IL1RAPL2Q9NP60 686 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 PIH1D3Q9NQM4 214 aaKnown RBP10.72□□□□□ -0.69
HERC4-214ENST00000513996 NDUFB9Q9Y6M9 179 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 MROH7-TTC4A0A0A0MT08 1334 aa10.72□□□□□ -0.69
HERC4-214ENST00000513996 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
HERC4-214ENST00000513996 DDTLA6NHG4 134 aaPredicted RBP10.71□□□□□ -0.69
HERC4-214ENST00000513996 MANSC4A6NHS7 340 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms