RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ZNF444Q8N0Y2 327 aaPredicted RBP8.78□□□□□ -1
CLCN3-209ENST00000513761 TMTC2Q8N394 836 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 MAGEB6Q8N7X4 407 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 METTL22Q9BUU2 404 aaPredicted RBP8.78□□□□□ -1
CLCN3-209ENST00000513761 EFCAB8A8MWE9 144 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 CUTAO60888 179 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 UQCRFS1P1P0C7P4 283 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 KCNJ14Q9UNX9 436 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 SYNRGQ9UMZ2 1314 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 GPAA1O43292 621 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 PFKFB2O60825 505 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 KRT2P35908 639 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 VPS36Q86VN1 386 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 DZIP1Q86YF9 867 aaKnown RBP8.78□□□□□ -1
CLCN3-209ENST00000513761 MLKLQ8NB16 471 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 KAT14Q9H8E8 782 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 CDC25BP30305 580 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 GCKRQ14397 625 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 TMEM266Q2M3C6 531 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 TTF2Q9UNY4 1162 aaKnown RBP8.78□□□□□ -1
CLCN3-209ENST00000513761 TUBBP07437 444 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 ATP5JP18859 108 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 KIF5BP33176 963 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 CLIC6Q96NY7 704 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 PSMB7Q99436 277 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 BABAM1Q9NWV8 329 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 TNRQ92752 1358 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 TAF5LO75529 589 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 KRT9P35527 623 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 CLCN6P51797 869 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 TAB2Q9NYJ8 693 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 ANKRD62A6NC57 917 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 HOXB7P09629 217 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 NF2P35240 595 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 RILPL1Q5EBL4 403 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 IQUBQ8NA54 791 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 PI4K2BQ8TCG2 481 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 EYA2O00167 538 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 IP6K1Q92551 441 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 RAB34Q9BZG1 259 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 SERTAD1Q9UHV2 236 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 STX8Q9UNK0 236 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 PSDA5PKW4 1024 aaPredicted RBP8.77□□□□□ -1.01
CLCN3-209ENST00000513761 GOLGA6CA6NDK9 693 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 GOLGA6DP0CG33 693 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 TERF2Q15554 542 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 CYP26C1Q6V0L0 522 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 GOLGA6AQ9NYA3 693 aa8.77□□□□□ -1.01
CLCN3-209ENST00000513761 GBP2P32456 591 aaPredicted RBP8.76□□□□□ -1.01
CLCN3-209ENST00000513761 SSR1P43307 286 aaKnown RBP8.76□□□□□ -1.01
CLCN3-209ENST00000513761 NBPF6Q5VWK0 638 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 NBPF4Q96M43 638 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 PDE11AQ9HCR9 933 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 USP27XA6NNY8 438 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 VAV2P52735 878 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 HEATR3Q7Z4Q2 680 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
CLCN3-209ENST00000513761 GOLGA6L10A0A0M3HER8 536 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 NDUFAB1O14561 156 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 MBD4O95243 580 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 CYP21A2P08686 494 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 ADD1P35611 737 aaKnown RBP8.76□□□□□ -1.01
CLCN3-209ENST00000513761 DDIT3P35638 169 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 ZNF76P36508 570 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 RNASE9P60153 205 aaKnown RBP8.76□□□□□ -1.01
CLCN3-209ENST00000513761 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 hCG_1642624A0A1W2PR95 340 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 ARHGEF10O15013 1369 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 CLASP1Q7Z460 1538 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 APPBP2Q92624 585 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 FAM89AQ96GI7 184 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 SCLT1Q96NL6 688 aa8.76□□□□□ -1.01
CLCN3-209ENST00000513761 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
CLCN3-209ENST00000513761 MYOM2P54296 1465 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 MPHOSPH10O00566 681 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 PDIA3P30101 505 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 CFAP58Q5T655 872 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 CCDC121Q6ZUS5 278 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 ADCY9O60503 1353 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 HPDP32754 393 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 BRD3Q15059 726 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 PROSER3Q2NL68 480 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 DSCC1Q9BVC3 393 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 GSTTP1A0A1W2PQM5 241 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 GCP02774 474 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 HSPD1P10809 573 aaKnown RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 PPM1EQ8WY54 764 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 ZNF274Q96GC6 653 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-209ENST00000513761 CCDC114Q96M63 670 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 SPAG5Q96R06 1193 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 BLZF1Q9H2G9 400 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 PLEKHA4Q9H4M7 779 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 NEURL1BA8MQ27 555 aa8.75□□□□□ -1.01
CLCN3-209ENST00000513761 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms