RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	MFAP1	P55081	439 aa	Known RBP	18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	TNFAIP1	Q13829	316 aa		18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	MIGA1	Q8NAN2	632 aa		18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ZNF384	Q8TF68	577 aa		18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ZC3H15	Q8WU90	426 aa	Known RBP	18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	DCPS	Q96C86	337 aa	Known RBP	18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	PRMT6	Q96LA8	375 aa	Predicted RBP	18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	USP40	Q9NVE5	1235 aa		18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	UTRN	P46939	3433 aa		18.94	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ECM29	Q5VYK3	1845 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	TCRBV5S4A2T	A0A5A2	114 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	TNNI2	P48788	182 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	PPP4C	P60510	307 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	NBPF9	Q3BBW0	867 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	TDRD3	Q9H7E2	651 aa	Known RBP	18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	VEZT	Q9HBM0	779 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	HELLS	Q9NRZ9	838 aa		18.93	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ADAMTSL1	Q8N6G6	1762 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	SPDYE2	Q495Y8	402 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ZMYM1	Q5SVZ6	1142 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ADGRA1	Q86SQ6	560 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	LDHD	Q86WU2	507 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	TEX11	Q8IYF3	940 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	DDRGK1	Q96HY6	314 aa		18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ZBED3	Q96IU2	234 aa	Predicted RBP	18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ZNF70	Q9UC06	446 aa	Predicted RBP	18.92	■□□□□ 0.62
SH3TC1-223	ENST00000513495	CDC45	O75419	566 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	MBD4	O95243	580 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	EGFR	P00533	1210 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	GNAT2	P19087	354 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ANGEL2	Q5VTE6	544 aa	Known RBP	18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	CDC42EP5	Q6NZY7	148 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	GGA3	Q9NZ52	723 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	PCDHAC2	Q9Y5I4	1007 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	PITPNM2	Q9BZ72	1349 aa		18.91	■□□□□ 0.62
SH3TC1-223	ENST00000513495	CLRN2	A0PK11	232 aa		18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	USP5	P45974	858 aa		18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	HIRA	P54198	1017 aa	Predicted RBP	18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	NMI	Q13287	307 aa	Predicted RBP	18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	MCMDC2	Q4G0Z9	681 aa		18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	FKBP1C	Q5VVH2	108 aa		18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	CWC27	Q6UX04	472 aa	Known RBP	18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	SULF1	Q8IWU6	871 aa		18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.9	■□□□□ 0.62
SH3TC1-223	ENST00000513495	CHML	P26374	656 aa		18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	DYNLL1	P63167	89 aa	Known RBP	18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	OSBP2	Q969R2	916 aa		18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	PUS7L	Q9H0K6	701 aa	Known RBP	18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	ARMT1	Q9H993	441 aa		18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	RAD50	Q92878	1312 aa		18.89	■□□□□ 0.61
SH3TC1-223	ENST00000513495	GPAA1	O43292	621 aa		18.88	■□□□□ 0.61
SH3TC1-223	ENST00000513495	LCORL	Q8N3X6	602 aa		18.88	■□□□□ 0.61
SH3TC1-223	ENST00000513495	FAM227B	Q96M60	508 aa		18.88	■□□□□ 0.61
SH3TC1-223	ENST00000513495	RIOK1	Q9BRS2	568 aa	Known RBP	18.88	■□□□□ 0.61
SH3TC1-223	ENST00000513495	PPP2R3B	Q9Y5P8	575 aa		18.88	■□□□□ 0.61
SH3TC1-223	ENST00000513495		A0A0D9SFI3	127 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	TCP10L2	B9ZVM9	353 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495		M0R2C6	588 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	CHGB	P05060	677 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	RHBDL3	P58872	404 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	PICALM	Q13492	652 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	SLFNL1	Q499Z3	407 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	CDC37L1	Q7L3B6	337 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	KRT26	Q7Z3Y9	468 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	AMOTL1	Q8IY63	956 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	IDI2	Q9BXS1	227 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	NACAP1	Q9BZK3	213 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	PGAP2	Q9UHJ9	254 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	SLC4A4	Q9Y6R1	1079 aa		18.87	■□□□□ 0.61
SH3TC1-223	ENST00000513495	CCDC171	Q6TFL3	1326 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	EIF5B	O60841	1220 aa	Known RBP	18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	ENTPD3	O75355	529 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	NPM3	O75607	178 aa	Known RBP	18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	APP	P05067	770 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	CACNB3	P54284	484 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	CHADL	Q6NUI6	762 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	KIAA1211	Q6ZU35	1233 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	FAM83A	Q86UY5	434 aa		18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	STRBP	Q96SI9	672 aa	Known RBP	18.86	■□□□□ 0.61
SH3TC1-223	ENST00000513495	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	ASTN2	O75129	1339 aa	Predicted RBP	18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	KIF3C	O14782	793 aa		18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	SMC1B	Q8NDV3	1235 aa		18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	TGFBRAP1	Q8WUH2	860 aa		18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	HOOK2	Q96ED9	719 aa		18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	SEC62	Q99442	399 aa	Known RBP	18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	ATP8A2	Q9NTI2	1148 aa		18.85	■□□□□ 0.61
SH3TC1-223	ENST00000513495	WDHD1	O75717	1129 aa	Predicted RBP	18.84	■□□□□ 0.61
SH3TC1-223	ENST00000513495	TOMM70	O94826	608 aa		18.84	■□□□□ 0.61
SH3TC1-223	ENST00000513495	TCP10	Q12799	353 aa		18.84	■□□□□ 0.61
SH3TC1-223	ENST00000513495	MAPKAPK5	Q8IW41	473 aa		18.84	■□□□□ 0.61
SH3TC1-223	ENST00000513495	FAM151A	Q8WW52	585 aa		18.84	■□□□□ 0.61
SH3TC1-223	ENST00000513495	DEFB129	Q9H1M3	183 aa		18.84	■□□□□ 0.61
SH3TC1-223	ENST00000513495	FLT1	P17948	1338 aa		18.83	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms