RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 TRAF5O00463 557 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 ANP32CO43423 234 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 PDE8AO60658 829 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
TRIO-220ENST00000512979 FOXD4L5Q5VV16 416 aaPredicted RBP12.08□□□□□ -0.48
TRIO-220ENST00000512979 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 FOXD4L4Q8WXT5 416 aaPredicted RBP12.08□□□□□ -0.48
TRIO-220ENST00000512979 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
TRIO-220ENST00000512979 EYA3Q99504 573 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 PCNTO95613 3336 aa12.08□□□□□ -0.48
TRIO-220ENST00000512979 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 PSMD14O00487 310 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 ST18O60284 1047 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 ECE2O60344 883 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 F12P00748 615 aaPredicted RBP12.07□□□□□ -0.48
TRIO-220ENST00000512979 TBC1D16Q8TBP0 767 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 TRPM4Q8TD43 1214 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 ANKIB1Q9P2G1 1089 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 MAP10Q9P2G4 905 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 CNOT7Q9UIV1 285 aaKnown RBP12.07□□□□□ -0.48
TRIO-220ENST00000512979 SALL2Q9Y467 1007 aaPredicted RBP12.07□□□□□ -0.48
TRIO-220ENST00000512979 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 IL16Q14005 1332 aa12.07□□□□□ -0.48
TRIO-220ENST00000512979 H7C1D1 291 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 FOXN1O15353 648 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 UFL1O94874 794 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 IGKV5-2P06315 115 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 HIRAP54198 1017 aaPredicted RBP12.06□□□□□ -0.48
TRIO-220ENST00000512979 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 GGA1Q9UJY5 639 aa12.06□□□□□ -0.48
TRIO-220ENST00000512979 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
TRIO-220ENST00000512979 CTSWP56202 376 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 CST9Q5W186 159 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 G2E3Q7L622 706 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 ANKRD18AQ8IVF6 992 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 DPF2Q92785 391 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
TRIO-220ENST00000512979 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
TRIO-220ENST00000512979 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 FANCIQ9NVI1 1328 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 RTL9Q8NET4 1388 aa12.05□□□□□ -0.48
TRIO-220ENST00000512979 NEURL1BA8MQ27 555 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 CELF2O95319 508 aaKnown RBP12.04□□□□□ -0.48
TRIO-220ENST00000512979 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
TRIO-220ENST00000512979 JUNDP17535 347 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
TRIO-220ENST00000512979 GRM1Q13255 1194 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 CWF19L2Q2TBE0 894 aaKnown RBP12.04□□□□□ -0.48
TRIO-220ENST00000512979 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 WBP1LQ9NX94 342 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 PGAP2Q9UHJ9 254 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 TLL2Q9Y6L7 1015 aa12.04□□□□□ -0.48
TRIO-220ENST00000512979 SKIP12755 728 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 RPS12P25398 132 aaKnown RBP12.03□□□□□ -0.48
TRIO-220ENST00000512979 ECE1P42892 770 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 PPP4CP60510 307 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 PTPRNQ16849 979 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
TRIO-220ENST00000512979 CYP4F22Q6NT55 531 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 CAPNS2Q96L46 248 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 CDC5LQ99459 802 aaKnown RBP12.03□□□□□ -0.48
TRIO-220ENST00000512979 ZNF408Q9H9D4 720 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 XDHP47989 1333 aa12.03□□□□□ -0.48
TRIO-220ENST00000512979 USP17L3A6NCW0 530 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 USP17L4A6NCW7 530 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 ATP2B4P23634 1241 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 CTHP32929 405 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
TRIO-220ENST00000512979 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
TRIO-220ENST00000512979 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 WDR63Q8IWG1 891 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 TTLL11Q8NHH1 800 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 GREM2Q9H772 168 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
TRIO-220ENST00000512979 H7C1W4 665 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 VAMP4O75379 141 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 NR1I2O75469 434 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 EGFRP00533 1210 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
TRIO-220ENST00000512979 EXOSC9Q06265 439 aaKnown RBP12.01□□□□□ -0.49
TRIO-220ENST00000512979 ELOAQ14241 798 aaKnown RBP12.01□□□□□ -0.49
TRIO-220ENST00000512979 GCKRQ14397 625 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 SAPCD2Q86UD0 394 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 PRDM10Q9NQV6 1147 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
TRIO-220ENST00000512979 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
TRIO-220ENST00000512979 PCDHB3Q9Y5E6 796 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms