RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 CTNNA3Q9UI47 895 aa12.5□□□□□ -0.41
LINC01550-203ENST00000512901 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
LINC01550-203ENST00000512901 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
LINC01550-203ENST00000512901 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
LINC01550-203ENST00000512901 GPR75-ASB3A0A0A6YYF3 556 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 PRKAB2O43741 272 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 PLCG2P16885 1265 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 OGFOD1Q8N543 542 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 ZKSCAN1P17029 563 aaPredicted RBP12.49□□□□□ -0.41
LINC01550-203ENST00000512901 TDO2P48775 406 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 PPP4CP60510 307 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 HDLBPQ00341 1268 aaKnown RBP12.49□□□□□ -0.41
LINC01550-203ENST00000512901 SH3RF3Q8TEJ3 882 aaPredicted RBP12.49□□□□□ -0.41
LINC01550-203ENST00000512901 SDR42E1Q8WUS8 393 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 NAPBQ9H115 298 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 SERPINA10Q9UK55 444 aa12.49□□□□□ -0.41
LINC01550-203ENST00000512901 UTRNP46939 3433 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 ADAMTSL1Q8N6G6 1762 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 RPAP1Q9BWH6 1393 aaPredicted RBP12.48□□□□□ -0.41
LINC01550-203ENST00000512901 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 USP5P45974 858 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 GMLQ99445 158 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 MRIQ9BWK5 157 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
LINC01550-203ENST00000512901 SLC27A2O14975 620 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 FOXP2O15409 715 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 FGAP02671 866 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 C9orf131Q5VYM1 1079 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 PALD1Q9ULE6 856 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 TIAM2Q8IVF5 1701 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 RPS12P25398 132 aaKnown RBP12.47□□□□□ -0.41
LINC01550-203ENST00000512901 ANAPC15P60006 121 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 IMMTQ16891 758 aaKnown RBP12.47□□□□□ -0.41
LINC01550-203ENST00000512901 CFAP100Q494V2 611 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
LINC01550-203ENST00000512901 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
LINC01550-203ENST00000512901 GMPSP49915 693 aaPredicted RBP12.46□□□□□ -0.41
LINC01550-203ENST00000512901 ALX1Q15699 326 aa12.46□□□□□ -0.41
LINC01550-203ENST00000512901 ATP8A2Q9NTI2 1148 aa12.46□□□□□ -0.41
LINC01550-203ENST00000512901 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
LINC01550-203ENST00000512901 SNX14Q9Y5W7 946 aa12.46□□□□□ -0.41
LINC01550-203ENST00000512901 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.41
LINC01550-203ENST00000512901 ZNF213O14771 459 aa12.46□□□□□ -0.42
LINC01550-203ENST00000512901 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.42
LINC01550-203ENST00000512901 HAND2P61296 217 aa12.46□□□□□ -0.42
LINC01550-203ENST00000512901 DLGAP5Q15398 846 aa12.46□□□□□ -0.42
LINC01550-203ENST00000512901 TGFBRAP1Q8WUH2 860 aa12.46□□□□□ -0.42
LINC01550-203ENST00000512901 ZMYM6O95789 1325 aa12.46□□□□□ -0.42
LINC01550-203ENST00000512901 CYP21A2P08686 494 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 RHBDL3P58872 404 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
LINC01550-203ENST00000512901 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 GPC2Q8N158 579 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 PCDHAC2Q9Y5I4 1007 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 MMP14P50281 582 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 KRT32Q14532 448 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 CDC42EP5Q6NZY7 148 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 MAPKAPK5Q8IW41 473 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
LINC01550-203ENST00000512901 MCM9Q9NXL9 1143 aa12.45□□□□□ -0.42
LINC01550-203ENST00000512901 NAV1Q8NEY1 1877 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 ECM29Q5VYK3 1845 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 MINDY4BA8MYZ0 360 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 PICALMQ13492 652 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 MICALL2Q8IY33 904 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 DPF2Q92785 391 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 KCNB2Q92953 911 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
LINC01550-203ENST00000512901 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 RABEP1Q15276 862 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
LINC01550-203ENST00000512901 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
LINC01550-203ENST00000512901 KIF2CQ99661 725 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
LINC01550-203ENST00000512901 MYOZ2Q9NPC6 264 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 TMOD2Q9NZR1 351 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
LINC01550-203ENST00000512901 CNOT7Q9UIV1 285 aaKnown RBP12.43□□□□□ -0.42
LINC01550-203ENST00000512901 FOCADQ5VW36 1801 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 H7C1D1 291 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 MYO1BO43795 1136 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 PSMA5P28066 241 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 RBM26Q5T8P6 1007 aaKnown RBP12.43□□□□□ -0.42
LINC01550-203ENST00000512901 FLT1P17948 1338 aa12.43□□□□□ -0.42
LINC01550-203ENST00000512901 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 USP17L21D6R901 530 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms