RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 TM4SF1P30408 202 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 PRKAR2BP31323 418 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 DDR1Q08345 913 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 TEFQ10587 303 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 PLEKHM2Q8IWE5 1019 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 TTC5Q8N0Z6 440 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 ZNF358Q9NW07 568 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 UBR3Q6ZT12 1888 aa9.17□□□□□ -0.94
RFC1-215ENST00000512881 COL3A1P02461 1466 aaPredicted RBP9.16□□□□□ -0.94
RFC1-215ENST00000512881 USP17L3A6NCW0 530 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 USP17L4A6NCW7 530 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 STARD3NLO95772 234 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
RFC1-215ENST00000512881 CANXP27824 592 aaKnown RBP9.16□□□□□ -0.94
RFC1-215ENST00000512881 EPHA4P54764 986 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
RFC1-215ENST00000512881 EFHC2Q5JST6 749 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 ZNF790Q6PG37 636 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 USP17L2Q6R6M4 530 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 USP17L1Q7RTZ2 530 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 ZNF496Q96IT1 587 aaPredicted RBP9.16□□□□□ -0.94
RFC1-215ENST00000512881 NARFQ9UHQ1 456 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 KIAA1024Q9UPX6 916 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 BCS1LQ9Y276 419 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 ZBTB1Q9Y2K1 713 aa9.16□□□□□ -0.94
RFC1-215ENST00000512881 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.94
RFC1-215ENST00000512881 CDK2AP1O14519 115 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 BCRP11274 1271 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 KCNA3P22001 575 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 HDGFL1Q5TGJ6 251 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 ARHGAP27Q6ZUM4 889 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
RFC1-215ENST00000512881 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 TEX13AQ9BXU3 409 aaPredicted RBP9.15□□□□□ -0.94
RFC1-215ENST00000512881 ATXN7L1Q9ULK2 861 aaPredicted RBP9.15□□□□□ -0.94
RFC1-215ENST00000512881 PHF24Q9UPV7 400 aa9.15□□□□□ -0.94
RFC1-215ENST00000512881 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.95
RFC1-215ENST00000512881 C10orf71Q711Q0 1435 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 BTBD11A6QL63 1104 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 KCNQ3O43525 872 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 ATP9BO43861 1147 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 BNIP3LO60238 219 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 MAP2K3P46734 347 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
RFC1-215ENST00000512881 RASSF7Q02833 373 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 NFIXQ14938 502 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 FMNL2Q96PY5 1086 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 SCHIP1Q9P0W5 487 aaPredicted RBP9.14□□□□□ -0.95
RFC1-215ENST00000512881 PIM2Q9P1W9 311 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
RFC1-215ENST00000512881 CEP350Q5VT06 3117 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 MRC1P22897 1456 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 ATP10DQ9P241 1426 aa9.14□□□□□ -0.95
RFC1-215ENST00000512881 ZNF831Q5JPB2 1677 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 A0A087WZG4 1122 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 BACH1O14867 736 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 CLDN10P78369 228 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 FOXK2Q01167 660 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
RFC1-215ENST00000512881 MCM10Q7L590 875 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 ZNF526Q8TF50 670 aaPredicted RBP9.13□□□□□ -0.95
RFC1-215ENST00000512881 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
RFC1-215ENST00000512881 OXCT2Q9BYC2 517 aaPredicted RBP9.13□□□□□ -0.95
RFC1-215ENST00000512881 ZDHHC3Q9NYG2 299 aa9.13□□□□□ -0.95
RFC1-215ENST00000512881 CICQ96RK0 1608 aaPredicted RBP9.13□□□□□ -0.95
RFC1-215ENST00000512881 COL15A1P39059 1388 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 CEMIPQ8WUJ3 1361 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 KCPQ6ZWJ8 1503 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 A1BGP04217 495 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 SERPINB2P05120 415 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 FGFR3P22607 806 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 CHRNA5P30532 468 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
RFC1-215ENST00000512881 ZDHHC1Q8WTX9 485 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 GLMNQ92990 594 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 HCN2Q9UL51 889 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 ADCY9O60503 1353 aa9.12□□□□□ -0.95
RFC1-215ENST00000512881 OIP5O43482 229 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 HTATSF1O43719 755 aaKnown RBP9.11□□□□□ -0.95
RFC1-215ENST00000512881 IRS1P35568 1242 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 IL6STP40189 918 aaPredicted RBP9.11□□□□□ -0.95
RFC1-215ENST00000512881 DCTN1Q14203 1278 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 BICDL1Q6ZP65 573 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 TRIM50Q86XT4 487 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 AIDAQ96BJ3 306 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 SCARF2Q96GP6 870 aaPredicted RBP9.11□□□□□ -0.95
RFC1-215ENST00000512881 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 MYH14Q7Z406 1995 aaKnown RBP9.11□□□□□ -0.95
RFC1-215ENST00000512881 CHD4Q14839 1912 aa9.11□□□□□ -0.95
RFC1-215ENST00000512881 C2CD2LO14523 706 aa9.1□□□□□ -0.95
RFC1-215ENST00000512881 ZBTB7BO15156 539 aaPredicted RBP9.1□□□□□ -0.95
RFC1-215ENST00000512881 GDF11O95390 407 aa9.1□□□□□ -0.95
RFC1-215ENST00000512881 TAF7Q15545 349 aaPredicted RBP9.1□□□□□ -0.95
RFC1-215ENST00000512881 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms