RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 LDHBP07195 334 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-229ENST00000512418 PHKA1P46020 1223 aa18.27■□□□□ 0.52
CCHCR1-229ENST00000512418 DIXDC1Q155Q3 683 aa18.27■□□□□ 0.52
CCHCR1-229ENST00000512418 ERO1BQ86YB8 467 aa18.27■□□□□ 0.52
CCHCR1-229ENST00000512418 FAM151AQ8WW52 585 aa18.27■□□□□ 0.52
CCHCR1-229ENST00000512418 PDE4DIPQ5VU43 2346 aa18.27■□□□□ 0.51
CCHCR1-229ENST00000512418 SP3Q02447 781 aa18.26■□□□□ 0.51
CCHCR1-229ENST00000512418 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
CCHCR1-229ENST00000512418 CD99L2Q8TCZ2 262 aa18.26■□□□□ 0.51
CCHCR1-229ENST00000512418 ZNF341Q9BYN7 854 aa18.26■□□□□ 0.51
CCHCR1-229ENST00000512418 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 MTX1Q13505 466 aa18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 TAF1CQ15572 869 aaPredicted RBP18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 ZGPATQ8N5A5 531 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 ZKSCAN4Q969J2 545 aaPredicted RBP18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 ZFYVE28Q9HCC9 887 aa18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 CENPFP49454 3210 aa18.25■□□□□ 0.51
CCHCR1-229ENST00000512418 CETPP11597 493 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 ADORA1P30542 326 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 NFIAQ12857 509 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 MIGA2Q7L4E1 593 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 EFCC1Q9HA90 598 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 ZCCHC17Q9NP64 241 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 PTPN22Q9Y2R2 807 aa18.24■□□□□ 0.51
CCHCR1-229ENST00000512418 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 IRF6O14896 467 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 TRIM27P14373 513 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 TIMM10P62072 90 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 TCP10Q12799 353 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 PPIL2Q13356 520 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 SNAPC2Q13487 334 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 RASGRF1Q13972 1273 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 USP40Q9NVE5 1235 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 AKAP2Q9Y2D5 859 aa18.23■□□□□ 0.51
CCHCR1-229ENST00000512418 A0A1B0GUL7 405 aa18.22■□□□□ 0.51
CCHCR1-229ENST00000512418 PPATQ06203 517 aa18.22■□□□□ 0.51
CCHCR1-229ENST00000512418 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
CCHCR1-229ENST00000512418 MYH2Q9UKX2 1941 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 INPP5BP32019 993 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 TFCP2Q12800 502 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 ARHGEF6Q15052 776 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 DZIP1Q86YF9 867 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 FRAT1Q92837 279 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 ZNF112Q9UJU3 913 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 AK9Q5TCS8 1911 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 GAKO14976 1311 aa18.21■□□□□ 0.51
CCHCR1-229ENST00000512418 BTBD19C9JJ37 291 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 BCAR3O75815 825 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 GNAI2P04899 355 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 CAP1Q01518 475 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 SLF2Q8IX21 1173 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 ABCF2Q9UG63 623 aa18.2■□□□□ 0.5
CCHCR1-229ENST00000512418 RFX7Q2KHR2 1363 aa18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 TLR2O60603 784 aa18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 NOL9Q5SY16 702 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 SPTY2D1Q68D10 685 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 ARMC5Q96C12 935 aa18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 IDI2Q9BXS1 227 aa18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 BRCA2P51587 3418 aa18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
CCHCR1-229ENST00000512418 ENTPD3O75355 529 aa18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 RGS3P49796 1198 aa18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 FAM163AQ96GL9 167 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 KCNH4Q9UQ05 1017 aa18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
CCHCR1-229ENST00000512418 ATRNL1Q5VV63 1379 aa18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 RBBP6Q7Z6E9 1792 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 SLC34A2O95436 690 aa18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 ZFPM1Q8IX07 1006 aa18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 NEUROD6Q96NK8 337 aa18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 MROH7-TTC4A0A0A0MT08 1334 aa18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 MKI67P46013 3256 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-229ENST00000512418 PNMA6EA0A0J9YXQ4 647 aa18.16■□□□□ 0.5
CCHCR1-229ENST00000512418 KIF22Q14807 665 aa18.16■□□□□ 0.5
CCHCR1-229ENST00000512418 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
CCHCR1-229ENST00000512418 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
CCHCR1-229ENST00000512418 ANKRD23Q86SG2 305 aa18.16■□□□□ 0.5
CCHCR1-229ENST00000512418 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 BTDP43251 543 aa18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 LACTBP83111 547 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 MECOMQ03112 1051 aa18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 GORABQ5T7V8 394 aa18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 HMG20BQ9P0W2 317 aa18.15■□□□□ 0.5
CCHCR1-229ENST00000512418 PHF20L1A8MW92 1017 aa18.14■□□□□ 0.49
CCHCR1-229ENST00000512418 PDHXO00330 501 aa18.14■□□□□ 0.49
CCHCR1-229ENST00000512418 GNRH1P01148 92 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms