RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ASTE1Q2TB18 679 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 TLDC1Q6P9B6 456 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 RSRC2Q7L4I2 434 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 BMP8AQ7Z5Y6 402 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 DPF3Q92784 378 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 KAT2BQ92831 832 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 NELL1Q92832 810 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CNTRLQ7Z7A1 2325 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 MIA3Q5JRA6 1907 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ERVV-1B6SEH8 477 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CT47B1P0C2W7 299 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 PRIM1P49642 420 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 GOLGA2Q08379 1002 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 HS1BP3Q53T59 392 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 UTP14CQ5TAP6 766 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 LARP1Q6PKG0 1096 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 DPF2Q92785 391 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 POLR3GLQ9BT43 218 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ADAM7Q9H2U9 754 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 LCMT1Q9UIC8 334 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 UTP20O75691 2785 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAP3K15Q6ZN16 1313 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 SENP3-EIF4A1A0A087X0R7 540 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 GLTPD2A6NH11 291 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 NBPF26B4DH59 902 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 VEGFAP15692 232 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 HOXC9P31274 260 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 TNNT2P45379 298 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 GSCP56915 257 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 KLHL40Q2TBA0 621 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 NBPF14Q5TI25 921 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CC2D2BQ6DHV5 1058 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 NBPF10Q6P3W6 841 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 NBPF15Q8N660 670 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 RGS22Q8NE09 1264 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF830Q96NB3 372 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 PYCARDQ9ULZ3 195 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 GVINP1Q7Z2Y8 2422 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CLEC18AA5D8T8 446 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 RBAK-RBAKDNI3L0D1 243 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF263O14978 683 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZRSR1Q15695 479 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 TMEM132EQ6IEE7 984 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CLEC18BQ6UXF7 455 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ATF7IPQ6VMQ6 1270 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZC3H3Q8IXZ2 948 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CLEC18CQ8NCF0 446 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 TRIM58Q8NG06 486 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 AK7Q96M32 723 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 FAM205AQ6ZU69 1335 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 SHOX2O60902 331 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 HSP90AA1P07900 732 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 SRPK2P78362 688 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 CES4AQ5XG92 561 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 IQUBQ8NA54 791 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 SEC14L1Q92503 715 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 THUMPD2Q9BTF0 503 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 AFG3L2Q9Y4W6 797 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 HSPA8P11142 646 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ARHGAP25P42331 645 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 EZH2Q15910 746 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 IL17AQ16552 155 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 PLEKHO1Q53GL0 409 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 DHX40Q8IX18 779 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 NGEFQ8N5V2 710 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 MTMR6Q9Y217 621 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 OTOGLQ3ZCN5 2332 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 RP1L1Q8IWN7 2480 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 KCNQ3O43525 872 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 BAG4O95429 457 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 PIM1P11309 404 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 NCLP19338 710 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ITPK1Q13572 414 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF34Q8IZ26 560 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 TEX13AQ9BXU3 409 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 GOLPH3LQ9H4A5 285 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ST7Q9NRC1 585 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 HELZ2Q9BYK8 2649 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 PCDH15Q96QU1 1955 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 H0YGN5 161 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 SDSP20132 328 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 TOB1P50616 345 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 DMTNQ08495 405 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 C11orf91Q3C1V1 193 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 COL23A1Q86Y22 540 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 NFS1Q9Y697 457 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 DOCK8Q8NF50 2099 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 LZTS3O60299 673 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 RPS6KA5O75582 802 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 TTC22Q5TAA0 569 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 DEFB132Q7Z7B7 95 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 NUP205Q92621 2012 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 CFAP44Q96MT7 982 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 MEIS3Q99687 375 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZMYND15Q9H091 742 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 EPG5Q9HCE0 2579 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 MRS2Q9HD23 443 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 NARFQ9UHQ1 456 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ADAMTS20P59510 1910 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZMYM6O95789 1325 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms