RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TRPA1O75762 1119 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 MAP3K11Q16584 847 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 SPATA5Q8NB90 893 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
RNF4-215ENST00000511843 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 ZBTB40Q9NUA8 1239 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
RNF4-215ENST00000511843 PDS5AQ29RF7 1337 aaKnown RBP16.36■□□□□ 0.21
RNF4-215ENST00000511843 CAPN15O75808 1086 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 TCP10Q12799 353 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 NFIAQ12857 509 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
RNF4-215ENST00000511843 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 SLC10A4Q96EP9 437 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 BCL11AQ9H165 835 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
RNF4-215ENST00000511843 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
RNF4-215ENST00000511843 ZBTB22O15209 634 aa16.34■□□□□ 0.21
RNF4-215ENST00000511843 CA12O43570 354 aa16.34■□□□□ 0.21
RNF4-215ENST00000511843 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
RNF4-215ENST00000511843 MECOMQ03112 1051 aa16.34■□□□□ 0.21
RNF4-215ENST00000511843 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
RNF4-215ENST00000511843 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
RNF4-215ENST00000511843 IL1RAPL2Q9NP60 686 aa16.34■□□□□ 0.21
RNF4-215ENST00000511843 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 GJA5P36382 358 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 FAM83AQ86UY5 434 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 WNK4Q96J92 1243 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 ELP3Q9H9T3 547 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 FAM198AQ9UFP1 575 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 GAKO14976 1311 aa16.33■□□□□ 0.2
RNF4-215ENST00000511843 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
RNF4-215ENST00000511843 BTDP43251 543 aa16.32■□□□□ 0.2
RNF4-215ENST00000511843 FKBP1CQ5VVH2 108 aa16.32■□□□□ 0.2
RNF4-215ENST00000511843 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
RNF4-215ENST00000511843 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
RNF4-215ENST00000511843 MIGA2Q7L4E1 593 aa16.32■□□□□ 0.2
RNF4-215ENST00000511843 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
RNF4-215ENST00000511843 NDUFB9Q9Y6M9 179 aa16.32■□□□□ 0.2
RNF4-215ENST00000511843 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 RPAP1Q9BWH6 1393 aaPredicted RBP16.31■□□□□ 0.2
RNF4-215ENST00000511843 ZAP70P43403 619 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 VGLL4Q14135 290 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 CCDC158Q5M9N0 1113 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 AACSQ86V21 672 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
RNF4-215ENST00000511843 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
RNF4-215ENST00000511843 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
RNF4-215ENST00000511843 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 TBC1D8O95759 1140 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 RGS3P49796 1198 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 RPAP2Q8IXW5 612 aaPredicted RBP16.3■□□□□ 0.2
RNF4-215ENST00000511843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.3■□□□□ 0.2
RNF4-215ENST00000511843 RHPN1Q8TCX5 695 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
RNF4-215ENST00000511843 OPTNQ96CV9 577 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 DDX4Q9NQI0 724 aaKnown RBP16.3■□□□□ 0.2
RNF4-215ENST00000511843 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
RNF4-215ENST00000511843 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
RNF4-215ENST00000511843 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
RNF4-215ENST00000511843 TM4SF4P48230 202 aa16.29■□□□□ 0.2
RNF4-215ENST00000511843 MAP3K9P80192 1104 aa16.29■□□□□ 0.2
RNF4-215ENST00000511843 PICALMQ13492 652 aa16.29■□□□□ 0.2
RNF4-215ENST00000511843 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
RNF4-215ENST00000511843 REM2Q8IYK8 340 aaPredicted RBP16.29■□□□□ 0.2
RNF4-215ENST00000511843 FAM163AQ96GL9 167 aaPredicted RBP16.29■□□□□ 0.2
RNF4-215ENST00000511843 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
RNF4-215ENST00000511843 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
RNF4-215ENST00000511843 GPR75-ASB3A0A0A6YYF3 556 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 HMMRO75330 724 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 WDHD1O75717 1129 aaPredicted RBP16.28■□□□□ 0.2
RNF4-215ENST00000511843 ZBTB48P10074 688 aaPredicted RBP16.28■□□□□ 0.2
RNF4-215ENST00000511843 INPP5BP32019 993 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 RHBDL3P58872 404 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 SREBF2Q12772 1141 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 R3HDMLQ9H3Y0 253 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 CSADQ9Y600 493 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 SNCAIPQ9Y6H5 919 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 ATAD5Q96QE3 1844 aa16.28■□□□□ 0.2
RNF4-215ENST00000511843 DOCK1Q14185 1865 aa16.27■□□□□ 0.2
RNF4-215ENST00000511843 MANSC4A6NHS7 340 aaPredicted RBP16.27■□□□□ 0.2
RNF4-215ENST00000511843 UNCXA6NJT0 531 aa16.27■□□□□ 0.2
RNF4-215ENST00000511843 IGF2BP3O00425 579 aaKnown RBP eCLIP16.27■□□□□ 0.2
RNF4-215ENST00000511843 HSP90AB4PQ58FF6 505 aa16.27■□□□□ 0.2
RNF4-215ENST00000511843 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
RNF4-215ENST00000511843 ADGRA1Q86SQ6 560 aa16.27■□□□□ 0.2
RNF4-215ENST00000511843 ZSCAN29Q8IWY8 852 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms