RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 C19orf47Q8N9M1 422 aaKnown RBP8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 DEPDC7Q96QD5 511 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 FERD3LQ96RJ6 166 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 BRMS1Q9HCU9 246 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 MRPL42Q9Y6G3 142 aaKnown RBP8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 SBNO2Q9Y2G9 1366 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 MEIS3P2A8K0S8 358 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 BPNT1O95861 308 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 TCEAL1Q15170 157 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 KANK3Q6NY19 840 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 CCDC81Q6ZN84 652 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 C20orf204Q6ZNR8 217 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 JARID2Q92833 1246 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 SRPK1Q96SB4 655 aaKnown RBP8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 LACRTQ9GZZ8 138 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 R3HCC1Q9Y3T6 440 aaKnown RBP8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
HMGB1P47-201ENST00000511281 SELPP16109 830 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 MCM4P33991 863 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 BAG6P46379 1132 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 PIP4K2BP78356 416 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 CLCQ05315 142 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 PTPN11Q06124 597 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 DDR2Q16832 855 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 SLCO4C1Q6ZQN7 724 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 ANKRD13AQ8IZ07 590 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 RNPC3Q96LT9 517 aaKnown RBP8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 CRBNQ96SW2 442 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 OSGEPQ9NPF4 335 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 SH2B1Q9NRF2 756 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 POLR3KQ9Y2Y1 108 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 STARD13Q9Y3M8 1113 aa8.02□□□□□ -1.13
HMGB1P47-201ENST00000511281 VSIG8P0DPA2 414 aa8.01□□□□□ -1.13
HMGB1P47-201ENST00000511281 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
HMGB1P47-201ENST00000511281 CELF2-AS1Q8N7Q2 184 aa8.01□□□□□ -1.13
HMGB1P47-201ENST00000511281 GOLGA6L1Q8N7Z2 621 aa8.01□□□□□ -1.13
HMGB1P47-201ENST00000511281 CBX8Q9HC52 389 aa8.01□□□□□ -1.13
HMGB1P47-201ENST00000511281 ACTR10Q9NZ32 417 aa8.01□□□□□ -1.13
HMGB1P47-201ENST00000511281 FAM221BA6H8Z2 402 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
HMGB1P47-201ENST00000511281 GFRA2O00451 464 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
HMGB1P47-201ENST00000511281 LRRFIP1Q32MZ4 808 aaKnown RBP8□□□□□ -1.13
HMGB1P47-201ENST00000511281 PLEKHG4Q58EX7 1191 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 ILDR2Q71H61 639 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 TAB3Q8N5C8 712 aaPredicted RBP8□□□□□ -1.13
HMGB1P47-201ENST00000511281 GGA1Q9UJY5 639 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 GDF2Q9UK05 429 aaPredicted RBP8□□□□□ -1.13
HMGB1P47-201ENST00000511281 PCDHB14Q9Y5E9 798 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 SNCAIPQ9Y6H5 919 aa8□□□□□ -1.13
HMGB1P47-201ENST00000511281 TM4SF5O14894 197 aa7.99□□□□□ -1.13
HMGB1P47-201ENST00000511281 CYP11A1P05108 521 aa7.99□□□□□ -1.13
HMGB1P47-201ENST00000511281 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
HMGB1P47-201ENST00000511281 GK5Q6ZS86 529 aa7.99□□□□□ -1.13
HMGB1P47-201ENST00000511281 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.99□□□□□ -1.13
HMGB1P47-201ENST00000511281 PPM1GO15355 546 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 EPXP11678 715 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 CDK11BP21127 795 aaKnown RBP7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 ALAS2P22557 587 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 FXNQ16595 210 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 MAP1SQ66K74 1059 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 GDF6Q6KF10 455 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 JMYQ8N9B5 988 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 TM9SF2Q99805 663 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 BRINP2Q9C0B6 783 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 TMX1Q9H3N1 280 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 PRDM6Q9NQX0 595 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 PPME1Q9Y570 386 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
HMGB1P47-201ENST00000511281 ARL4DP49703 201 aa7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 MPRIPQ6WCQ1 1025 aa7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 IL22RA1Q8N6P7 574 aa7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 GPBAR1Q8TDU6 330 aa7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 ZNF669Q96BR6 464 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 IRX2Q9BZI1 471 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 IGF1RP08069 1367 aa7.97□□□□□ -1.13
HMGB1P47-201ENST00000511281 H3BM21 787 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 PDPK1O15530 556 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 CLSTN1O94985 981 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 AFF1P51825 1210 aaKnown RBP7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 GSTM4Q03013 218 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 KIF4BQ2VIQ3 1234 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 HGSNATQ68CP4 663 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 FAM117BQ6P1L5 589 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 GPR161Q8N6U8 529 aaKnown RBP7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 TMEM40Q8WWA1 233 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 TNKS2Q9H2K2 1166 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.14
HMGB1P47-201ENST00000511281 LCE2BO14633 110 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 FSCN2O14926 492 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms