RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 CRIPAKQ8N1N5 446 aa9.73□□□□□ -0.85
SMAD1-210ENST00000511255 JDP2Q8WYK2 163 aa9.73□□□□□ -0.85
SMAD1-210ENST00000511255 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
SMAD1-210ENST00000511255 CELF1Q92879 486 aaKnown RBP9.73□□□□□ -0.85
SMAD1-210ENST00000511255 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
SMAD1-210ENST00000511255 NMRK2Q9NPI5 230 aa9.73□□□□□ -0.85
SMAD1-210ENST00000511255 CDHR2Q9BYE9 1310 aa9.73□□□□□ -0.85
SMAD1-210ENST00000511255 SBF1O95248 1867 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 CACNA1FO60840 1977 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 J3QL48 77 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 PPIP5K2O43314 1243 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 SMPD1P17405 629 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 CTSWP56202 376 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 TMEM259Q4ZIN3 620 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 BEND3Q5T5X7 828 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 TMC4Q7Z404 712 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 SP8Q8IXZ3 490 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 C16orf71Q8IYS4 520 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-210ENST00000511255 TRMT2AQ8IZ69 625 aaKnown RBP9.72□□□□□ -0.85
SMAD1-210ENST00000511255 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 MPNDQ8N594 471 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 PSMD1Q99460 953 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 SRCIN1Q9C0H9 1055 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 SEC31BQ9NQW1 1179 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 C9orf78Q9NZ63 289 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-210ENST00000511255 DDX60Q8IY21 1712 aaKnown RBP9.72□□□□□ -0.85
SMAD1-210ENST00000511255 LAMB2P55268 1798 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 CCDC88AQ3V6T2 1871 aa9.72□□□□□ -0.85
SMAD1-210ENST00000511255 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-210ENST00000511255 GLTPD2A6NH11 291 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 H7C1W4 665 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-210ENST00000511255 RPS8P62241 208 aaKnown RBP9.71□□□□□ -0.86
SMAD1-210ENST00000511255 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 NSFL1CQ9UNZ2 370 aaKnown RBP9.71□□□□□ -0.86
SMAD1-210ENST00000511255 CHMP3Q9Y3E7 222 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 PTPRCP08575 1304 aa9.71□□□□□ -0.86
SMAD1-210ENST00000511255 TIAM2Q8IVF5 1701 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 ALDH1L1O75891 902 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 DDNO94850 711 aaPredicted RBP9.7□□□□□ -0.86
SMAD1-210ENST00000511255 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
SMAD1-210ENST00000511255 C1QTNF8P60827 252 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 AOC3Q16853 763 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 TTLL11Q8NHH1 800 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 CDC5LQ99459 802 aaKnown RBP9.7□□□□□ -0.86
SMAD1-210ENST00000511255 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 GREM2Q9H772 168 aa9.7□□□□□ -0.86
SMAD1-210ENST00000511255 GMPR2Q9P2T1 348 aaKnown RBP9.7□□□□□ -0.86
SMAD1-210ENST00000511255 GRM8O00222 908 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 TAF1P21675 1872 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 IGHMBP2P38935 993 aaKnown RBP9.69□□□□□ -0.86
SMAD1-210ENST00000511255 SH3RF1Q7Z6J0 888 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 SNED1Q8TER0 1413 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 ZNF541Q9H0D2 1346 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
SMAD1-210ENST00000511255 ZBED9Q6R2W3 1325 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 AVPP01185 164 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 VEGFAP15692 232 aaPredicted RBP9.68□□□□□ -0.86
SMAD1-210ENST00000511255 ITGA6P23229 1130 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 VARSP26640 1264 aaKnown RBP9.68□□□□□ -0.86
SMAD1-210ENST00000511255 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
SMAD1-210ENST00000511255 CASP7P55210 303 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 GPSM2P81274 684 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 ARMC2Q8NEN0 867 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 EYA3Q99504 573 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 MPHOSPH8Q99549 860 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 PLA2G12BQ9BX93 195 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 FKBPLQ9UIM3 349 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 NOB1Q9ULX3 412 aaKnown RBP9.68□□□□□ -0.86
SMAD1-210ENST00000511255 GJA3Q9Y6H8 435 aa9.68□□□□□ -0.86
SMAD1-210ENST00000511255 DICER1Q9UPY3 1922 aaKnown RBP9.68□□□□□ -0.86
SMAD1-210ENST00000511255 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 ANKRD18BA2A2Z9 1011 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 FZD9O00144 591 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 TOMM70O94826 608 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 UFL1O94874 794 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 INSM1Q01101 510 aaPredicted RBP9.67□□□□□ -0.86
SMAD1-210ENST00000511255 KIAA2012Q0VF49 1180 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 TAF7LQ5H9L4 462 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 RTFDC1Q9BY42 306 aaPredicted RBP9.67□□□□□ -0.86
SMAD1-210ENST00000511255 API5Q9BZZ5 524 aaKnown RBP9.67□□□□□ -0.86
SMAD1-210ENST00000511255 VPS33BQ9H267 617 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 GGA1Q9UJY5 639 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 COL4A1P02462 1669 aa9.67□□□□□ -0.86
SMAD1-210ENST00000511255 ALDH1A1P00352 501 aa9.66□□□□□ -0.86
SMAD1-210ENST00000511255 IFIT5Q13325 482 aaKnown RBP9.66□□□□□ -0.86
SMAD1-210ENST00000511255 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
SMAD1-210ENST00000511255 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
SMAD1-210ENST00000511255 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms