RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 NAGPAQ9UK23 515 aa6.32□□□□□ -1.4
SMAD1-208ENST00000510948 TRIM33Q9UPN9 1127 aa6.32□□□□□ -1.4
SMAD1-208ENST00000510948 PCDHB5Q9Y5E4 795 aa6.32□□□□□ -1.4
SMAD1-208ENST00000510948 NEURL1BA8MQ27 555 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 ESRRAP11474 423 aaPredicted RBP6.31□□□□□ -1.4
SMAD1-208ENST00000510948 ALAS2P22557 587 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 ARNTP27540 789 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 CDC27P30260 824 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 GAS6Q14393 721 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 PSAPL1Q6NUJ1 521 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 FCHSD1Q86WN1 690 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 SLITRK4Q8IW52 837 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 CKAP2LQ8IYA6 745 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 DDX54Q8TDD1 881 aaKnown RBP6.31□□□□□ -1.4
SMAD1-208ENST00000510948 CPLX3Q8WVH0 158 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 GATAD2BQ8WXI9 593 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
SMAD1-208ENST00000510948 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 MBIPQ9NS73 344 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 NXF1Q9UBU9 619 aaKnown RBP6.31□□□□□ -1.4
SMAD1-208ENST00000510948 FMN1Q68DA7 1419 aa6.31□□□□□ -1.4
SMAD1-208ENST00000510948 MAP3K1Q13233 1512 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 FAM221AA4D161 298 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 RGS9O75916 674 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-208ENST00000510948 F13A1P00488 732 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 ETFBP38117 255 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 CRKP46108 304 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 CABP4P57796 275 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 IKBKEQ14164 716 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 NBPF6Q5VWK0 638 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 DIEXFQ68CQ4 756 aaKnown RBP6.3□□□□□ -1.4
SMAD1-208ENST00000510948 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-208ENST00000510948 SULF2Q8IWU5 870 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 GPR161Q8N6U8 529 aaKnown RBP6.3□□□□□ -1.4
SMAD1-208ENST00000510948 NBPF4Q96M43 638 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 LRRC3Q9BY71 257 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 OSBPL2Q9H1P3 480 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 ZNF408Q9H9D4 720 aa6.3□□□□□ -1.4
SMAD1-208ENST00000510948 RAPGEF6Q8TEU7 1601 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 SOX1O00570 391 aaPredicted RBP6.29□□□□□ -1.4
SMAD1-208ENST00000510948 MPP2Q14168 576 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 SEZ6Q53EL9 994 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 GDF6Q6KF10 455 aaPredicted RBP6.29□□□□□ -1.4
SMAD1-208ENST00000510948 LLGL2Q6P1M3 1020 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 NPAS3Q8IXF0 933 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 STK35Q8TDR2 534 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 CBX8Q9HC52 389 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 GGA1Q9UJY5 639 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 MRVI1Q9Y6F6 885 aa6.29□□□□□ -1.4
SMAD1-208ENST00000510948 CASKIN1Q8WXD9 1431 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 TLDC2A0PJX2 215 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 TLR3O15455 904 aaKnown RBP6.28□□□□□ -1.4
SMAD1-208ENST00000510948 CILPO75339 1184 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 EPHA1P21709 976 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 MCM4P33991 863 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
SMAD1-208ENST00000510948 NUDT8Q8WV74 236 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 SRRTQ9BXP5 876 aaKnown RBP6.28□□□□□ -1.4
SMAD1-208ENST00000510948 PIF1Q9H611 641 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 GDF2Q9UK05 429 aaPredicted RBP6.28□□□□□ -1.4
SMAD1-208ENST00000510948 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
SMAD1-208ENST00000510948 H3BRJ5 948 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 LCE2BO14633 110 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
SMAD1-208ENST00000510948 ZNF165P49910 485 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 ZNF252P-AS1Q0IIN9 211 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 AP3B2Q13367 1082 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 SEPT6Q14141 434 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 GRIK5Q16478 980 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 ANKS3Q6ZW76 656 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 IL22RA1Q8N6P7 574 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 GOLGA6L1Q8N7Z2 621 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
SMAD1-208ENST00000510948 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
SMAD1-208ENST00000510948 CCDC18Q5T9S5 1454 aa6.27□□□□□ -1.41
SMAD1-208ENST00000510948 EHBP1L1Q8N3D4 1523 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 H3BM21 787 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 KLF4O43474 513 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 BPNT1O95861 308 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 ARL4DP49703 201 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 PDZD3Q86UT5 571 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 REXO1Q8N1G1 1221 aaKnown RBP6.26□□□□□ -1.41
SMAD1-208ENST00000510948 MKL1Q969V6 931 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 ANAPC16Q96DE5 110 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 SHDQ96IW2 340 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 PUS7Q96PZ0 661 aaKnown RBP6.26□□□□□ -1.41
SMAD1-208ENST00000510948 PRKAG3Q9UGI9 489 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 PPT2Q9UMR5 302 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 STARD13Q9Y3M8 1113 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 ABCA8O94911 1581 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 ERCC6L2Q5T890 1561 aa6.26□□□□□ -1.41
SMAD1-208ENST00000510948 CARMIL2Q6F5E8 1435 aa6.25□□□□□ -1.41
SMAD1-208ENST00000510948 TRIM37O94972 964 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms