RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 MKRN1Q9UHC7 482 aaKnown RBP10.91□□□□□ -0.66
PDPN-209ENST00000510906 MINPP1Q9UNW1 487 aa10.91□□□□□ -0.66
PDPN-209ENST00000510906 SOWAHBA6NEL2 793 aa10.9□□□□□ -0.66
PDPN-209ENST00000510906 CSF1RP07333 972 aa10.9□□□□□ -0.66
PDPN-209ENST00000510906 ITGA6P23229 1130 aa10.9□□□□□ -0.66
PDPN-209ENST00000510906 HIRAP54198 1017 aaPredicted RBP10.9□□□□□ -0.66
PDPN-209ENST00000510906 SLC4A10Q6U841 1118 aa10.9□□□□□ -0.66
PDPN-209ENST00000510906 TRPM4Q8TD43 1214 aa10.9□□□□□ -0.66
PDPN-209ENST00000510906 CNOT7Q9UIV1 285 aaKnown RBP10.9□□□□□ -0.66
PDPN-209ENST00000510906 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 TRAF5O00463 557 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 ATP2B4P23634 1241 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 IGHMBP2P38935 993 aaKnown RBP10.89□□□□□ -0.67
PDPN-209ENST00000510906 ABL2P42684 1182 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 FOXO4P98177 505 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 EPHA10Q5JZY3 1008 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 RETREG3Q86VR2 466 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 ANKK1Q8NFD2 765 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 SYMPKQ92797 1274 aaKnown RBP10.89□□□□□ -0.67
PDPN-209ENST00000510906 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
PDPN-209ENST00000510906 H7C1D1 291 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 GRM8O00222 908 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 CCT4P50991 539 aaKnown RBP10.88□□□□□ -0.67
PDPN-209ENST00000510906 IRF5Q13568 498 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 DESI1Q6ICB0 168 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 LRRN4Q8WUT4 740 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 SSH1Q8WYL5 1049 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 DPF2Q92785 391 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 SRCIN1Q9C0H9 1055 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 SERPINA10Q9UK55 444 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 CNTNAP1P78357 1384 aa10.88□□□□□ -0.67
PDPN-209ENST00000510906 ANKRD18BA2A2Z9 1011 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 ALDH1L1O75891 902 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 EGFRP00533 1210 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 VIL1P09327 827 aaKnown RBP10.87□□□□□ -0.67
PDPN-209ENST00000510906 RPS12P25398 132 aaKnown RBP10.87□□□□□ -0.67
PDPN-209ENST00000510906 Q3C1V9 767 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
PDPN-209ENST00000510906 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
PDPN-209ENST00000510906 LMBR1LQ6UX01 489 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 MPHOSPH8Q99549 860 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 GLIS2Q9BZE0 524 aaPredicted RBP10.87□□□□□ -0.67
PDPN-209ENST00000510906 C9orf78Q9NZ63 289 aaPredicted RBP10.87□□□□□ -0.67
PDPN-209ENST00000510906 PGAP2Q9UHJ9 254 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 MED23Q9ULK4 1368 aa10.87□□□□□ -0.67
PDPN-209ENST00000510906 KLRK1P26718 216 aa10.86□□□□□ -0.67
PDPN-209ENST00000510906 CHRNDQ07001 517 aa10.86□□□□□ -0.67
PDPN-209ENST00000510906 IFIT5Q13325 482 aaKnown RBP10.86□□□□□ -0.67
PDPN-209ENST00000510906 TXNRD3Q86VQ6 643 aa10.86□□□□□ -0.67
PDPN-209ENST00000510906 TRMT2AQ8IZ69 625 aaKnown RBP10.86□□□□□ -0.67
PDPN-209ENST00000510906 A0A0C4DFX4 3053 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 SNAP23O00161 211 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 NBPF7P0C2Y1 421 aaPredicted RBP10.85□□□□□ -0.67
PDPN-209ENST00000510906 VEGFBP49765 207 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 CST9Q5W186 159 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 DLK2Q6UY11 383 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 PODNQ7Z5L7 613 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 KAZALD1Q96I82 304 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 SUCLG2Q96I99 432 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 ZNF594Q96JF6 807 aaPredicted RBP10.85□□□□□ -0.67
PDPN-209ENST00000510906 ANKRD2Q9GZV1 360 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 TSR3Q9UJK0 312 aaKnown RBP10.85□□□□□ -0.67
PDPN-209ENST00000510906 ABT1Q9ULW3 272 aaKnown RBP10.85□□□□□ -0.67
PDPN-209ENST00000510906 LEMD3Q9Y2U8 911 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 CACNA1FO60840 1977 aa10.85□□□□□ -0.67
PDPN-209ENST00000510906 ZNF804BA4D1E1 1349 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 PTPRCP08575 1304 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 RASSF10A6NK89 507 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 POM121CA8CG34 1229 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 TAF5LO75529 589 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 BCAMP50895 628 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 KIF4BQ2VIQ3 1234 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 TSC1Q92574 1164 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 CCDC97Q96F63 343 aaPredicted RBP10.84□□□□□ -0.67
PDPN-209ENST00000510906 GMLQ99445 158 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 MXD3Q9BW11 206 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 SMC4Q9NTJ3 1288 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 MYH3P11055 1940 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 UTYO14607 1347 aa10.84□□□□□ -0.67
PDPN-209ENST00000510906 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
PDPN-209ENST00000510906 CELF2O95319 508 aaKnown RBP10.83□□□□□ -0.68
PDPN-209ENST00000510906 KCNJ4P48050 445 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 RGS19P49795 217 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 ZNF280AP59817 542 aaPredicted RBP10.83□□□□□ -0.68
PDPN-209ENST00000510906 PPP4CP60510 307 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 MLLT1Q03111 559 aaPredicted RBP10.83□□□□□ -0.68
PDPN-209ENST00000510906 DEFB115Q30KQ5 88 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 TAF7LQ5H9L4 462 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 DACT2Q5SW24 774 aa10.83□□□□□ -0.68
PDPN-209ENST00000510906 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms