RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 TTC21AQ8NDW8 1320 aa10.75□□□□□ -0.69
CAST-231ENST00000510245 LOC105371045A0A1W2PR82 267 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 IQCA1LA6NCM1 817 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 WIPF1O43516 503 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 OCLNQ16625 522 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 DBN1Q16643 649 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 B4GALNT3Q6L9W6 998 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
CAST-231ENST00000510245 SBF1O95248 1867 aa10.74□□□□□ -0.69
CAST-231ENST00000510245 MSX1P28360 303 aa10.73□□□□□ -0.69
CAST-231ENST00000510245 EAPPQ56P03 285 aaPredicted RBP10.73□□□□□ -0.69
CAST-231ENST00000510245 TRAPPC3LQ5T215 181 aa10.73□□□□□ -0.69
CAST-231ENST00000510245 SLC9A9Q8IVB4 645 aa10.73□□□□□ -0.69
CAST-231ENST00000510245 PGBD3Q8N328 593 aa10.73□□□□□ -0.69
CAST-231ENST00000510245 ZNF837Q96EG3 531 aaPredicted RBP10.73□□□□□ -0.69
CAST-231ENST00000510245 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
CAST-231ENST00000510245 SCHIP1Q9P0W5 487 aaPredicted RBP10.73□□□□□ -0.69
CAST-231ENST00000510245 IQSEC3Q9UPP2 1182 aaPredicted RBP10.73□□□□□ -0.69
CAST-231ENST00000510245 PATL2C9JE40 543 aaKnown RBP10.72□□□□□ -0.69
CAST-231ENST00000510245 TMCO4Q5TGY1 634 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 FOXR1Q6PIV2 292 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 SLC17A8Q8NDX2 589 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 GMCL1Q96IK5 515 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
CAST-231ENST00000510245 RUBCNLQ9H714 662 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
CAST-231ENST00000510245 THSD7BQ9C0I4 1608 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
CAST-231ENST00000510245 LOC102724428A0A0B4J2F2 783 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 DDNO94850 711 aaPredicted RBP10.71□□□□□ -0.69
CAST-231ENST00000510245 GYS1P13807 737 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 SERPINB4P48594 390 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 FXR1P51114 621 aaKnown RBP eCLIP10.71□□□□□ -0.69
CAST-231ENST00000510245 EPHA4P54764 986 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 SIK1P57059 783 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 INSM1Q01101 510 aaPredicted RBP10.71□□□□□ -0.69
CAST-231ENST00000510245 CYP4F22Q6NT55 531 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 GTPBP3Q969Y2 492 aaKnown RBP10.71□□□□□ -0.69
CAST-231ENST00000510245 CNTNAP3BQ96NU0 1288 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 MPHOSPH9Q99550 1183 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 CNTNAP3Q9BZ76 1288 aa10.71□□□□□ -0.69
CAST-231ENST00000510245 CXXC1Q9P0U4 656 aaPredicted RBP10.71□□□□□ -0.69
CAST-231ENST00000510245 GNEQ9Y223 722 aaKnown RBP10.71□□□□□ -0.69
CAST-231ENST00000510245 MEGF6O75095 1541 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 M0R2N6 131 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 GPR25O00155 361 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 RFC4P35249 363 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 NBPF1Q3BBV0 1214 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 TAF1DQ9H5J8 278 aaPredicted RBP10.7□□□□□ -0.7
CAST-231ENST00000510245 ZNF232Q9UNY5 417 aa10.7□□□□□ -0.7
CAST-231ENST00000510245 NFKBIEO00221 500 aa10.69□□□□□ -0.7
CAST-231ENST00000510245 FOXK2Q01167 660 aa10.69□□□□□ -0.7
CAST-231ENST00000510245 CAPN12Q6ZSI9 719 aa10.69□□□□□ -0.7
CAST-231ENST00000510245 DCAF11Q8TEB1 546 aa10.69□□□□□ -0.7
CAST-231ENST00000510245 TSPAN10Q9H1Z9 355 aaPredicted RBP10.69□□□□□ -0.7
CAST-231ENST00000510245 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 AOC2O75106 756 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 MAP2K2P36507 400 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 ITPK1Q13572 414 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 CNTROBQ8N137 903 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 CHMP3Q9Y3E7 222 aa10.68□□□□□ -0.7
CAST-231ENST00000510245 TATP17735 454 aaPredicted RBP10.67□□□□□ -0.7
CAST-231ENST00000510245 WEE1P30291 646 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 NOS2P35228 1153 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
CAST-231ENST00000510245 KRT76Q01546 638 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 FKBP5Q13451 457 aaPredicted RBP10.67□□□□□ -0.7
CAST-231ENST00000510245 TEAD4Q15561 434 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 ARSJQ5FYB0 599 aaPredicted RBP10.67□□□□□ -0.7
CAST-231ENST00000510245 EFHC2Q5JST6 749 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 RNFT1Q5M7Z0 435 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 MAP1SQ66K74 1059 aaPredicted RBP10.67□□□□□ -0.7
CAST-231ENST00000510245 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 ZDHHC1Q8WTX9 485 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 L3MBTL2Q969R5 705 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
CAST-231ENST00000510245 FAM208AQ9UK61 1670 aaKnown RBP10.66□□□□□ -0.7
CAST-231ENST00000510245 CGNL1Q0VF96 1302 aa10.66□□□□□ -0.7
CAST-231ENST00000510245 SERTM1A2A2V5 107 aa10.66□□□□□ -0.7
CAST-231ENST00000510245 ARID4AP29374 1257 aaPredicted RBP10.66□□□□□ -0.7
CAST-231ENST00000510245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAST-231ENST00000510245 CCER1Q8TC90 406 aaPredicted RBP10.66□□□□□ -0.7
CAST-231ENST00000510245 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
CAST-231ENST00000510245 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
CAST-231ENST00000510245 KTN1Q86UP2 1357 aaKnown RBP10.65□□□□□ -0.7
CAST-231ENST00000510245 PITPNM2Q9BZ72 1349 aa10.65□□□□□ -0.7
CAST-231ENST00000510245 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
CAST-231ENST00000510245 PSMA6P60900 246 aaKnown RBP10.65□□□□□ -0.7
CAST-231ENST00000510245 DDR1Q08345 913 aa10.65□□□□□ -0.7
CAST-231ENST00000510245 BICDL1Q6ZP65 573 aa10.65□□□□□ -0.7
CAST-231ENST00000510245 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
CAST-231ENST00000510245 C1orf216Q8TAB5 229 aa10.65□□□□□ -0.7
CAST-231ENST00000510245 SCG3Q8WXD2 468 aaKnown RBP10.65□□□□□ -0.7
CAST-231ENST00000510245 PIGBQ92521 554 aa10.65□□□□□ -0.7
CAST-231ENST00000510245 IP6K1Q92551 441 aa10.65□□□□□ -0.7
CAST-231ENST00000510245 DDX21Q9NR30 783 aaKnown RBP eCLIP10.65□□□□□ -0.7
CAST-231ENST00000510245 LTN1O94822 1766 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms