RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	GML	Q99445	158 aa		12.85	□□□□□ -0.35
PTPN20-222	ENST00000509774	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	NF2	P35240	595 aa		12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	GPSM2	P81274	684 aa		12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	ARMC9	Q7Z3E5	817 aa		12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	PLPP6	Q8IY26	295 aa		12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	MTMR10	Q9NXD2	777 aa		12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	FZD1	Q9UP38	647 aa		12.84	□□□□□ -0.35
PTPN20-222	ENST00000509774	USP17L8	P0C7I0	530 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	UBTFL1	P0CB47	393 aa	Predicted RBP	12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	RPS8	P62241	208 aa	Known RBP	12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	FOXK1	P85037	733 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	FOXO4	P98177	505 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	CLUAP1	Q96AJ1	413 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	WNK4	Q96J92	1243 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	CDC5L	Q99459	802 aa	Known RBP	12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	HTATIP2	Q9BUP3	242 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	ANGEL1	Q9UNK9	670 aa	Known RBP	12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	NR2E3	Q9Y5X4	410 aa		12.83	□□□□□ -0.36
PTPN20-222	ENST00000509774	OTOF	Q9HC10	1997 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	ZBTB48	P10074	688 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	RABL6	Q3YEC7	729 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	POTEE	Q6S8J3	1075 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	TMEM57	Q8N5G2	664 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	JARID2	Q92833	1246 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	CLMN	Q96JQ2	1002 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	EYA3	Q99504	573 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	PTPN18	Q99952	460 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	GPHN	Q9NQX3	736 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	STAP2	Q9UGK3	403 aa		12.82	□□□□□ -0.36
PTPN20-222	ENST00000509774	EYS	Q5T1H1	3165 aa		12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	COL9A1	P20849	921 aa		12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	IFIT5	Q13325	482 aa	Known RBP	12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	MTFR1	Q15390	333 aa		12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	LMBR1L	Q6UX01	489 aa		12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	TBC1D16	Q8TBP0	767 aa		12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	CELF1	Q92879	486 aa	Known RBP	12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	SLC10A4	Q96EP9	437 aa		12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	BSDC1	Q9NW68	430 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN20-222	ENST00000509774	ANKRD18B	A2A2Z9	1011 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	ITGA6	P23229	1130 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	GJA5	P36382	358 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	DSG2	Q14126	1118 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	CCDC57	Q2TAC2	916 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	ANKRD18A	Q8IVF6	992 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	PTCD2	Q8WV60	388 aa	Known RBP	12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	KAZALD1	Q96I82	304 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	SUCLG2	Q96I99	432 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	DDX19B	Q9UMR2	479 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	ECM29	Q5VYK3	1845 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	PRUNE2	Q8WUY3	3088 aa		12.8	□□□□□ -0.36
PTPN20-222	ENST00000509774	SSC5D	A1L4H1	1573 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	WNT10B	O00744	389 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	GNAI2	P04899	355 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	RLBP1	P12271	317 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	IGHMBP2	P38935	993 aa	Known RBP	12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	MVP	Q14764	893 aa	Known RBP	12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	OTUD7B	Q6GQQ9	843 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	ITPRIP	Q8IWB1	547 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	MEIS3	Q99687	375 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	BICC1	Q9H694	974 aa	Known RBP	12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	GREM2	Q9H772	168 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	RAPGEFL1	Q9UHV5	662 aa		12.79	□□□□□ -0.36
PTPN20-222	ENST00000509774	TESPA1	A2RU30	521 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	PLIN1	O60240	522 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	MTX1	Q13505	466 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	ARHGEF6	Q15052	776 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	MAP3K11	Q16584	847 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	EPHA10	Q5JZY3	1008 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	PANK1	Q8TE04	598 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	MPHOSPH8	Q99549	860 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	SEC31B	Q9NQW1	1179 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	TNN	Q9UQP3	1299 aa		12.78	□□□□□ -0.36
PTPN20-222	ENST00000509774	GJA8	P48165	433 aa		12.77	□□□□□ -0.37
PTPN20-222	ENST00000509774	RRP1	P56182	461 aa	Known RBP	12.77	□□□□□ -0.37
PTPN20-222	ENST00000509774	AAMP	Q13685	434 aa		12.77	□□□□□ -0.37
PTPN20-222	ENST00000509774	ANKRD44	Q8N8A2	993 aa		12.77	□□□□□ -0.37
PTPN20-222	ENST00000509774	ARHGAP39	Q9C0H5	1083 aa		12.77	□□□□□ -0.37
PTPN20-222	ENST00000509774	PODXL2	Q9NZ53	605 aa		12.77	□□□□□ -0.37
PTPN20-222	ENST00000509774	SASH1	O94885	1247 aa		12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	TAF7L	Q5H9L4	462 aa		12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	NKX2-3	Q8TAU0	364 aa		12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	GDF15	Q99988	308 aa		12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	ANKRD2	Q9GZV1	360 aa		12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	CHMP3	Q9Y3E7	222 aa		12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	LRRFIP2	Q9Y608	721 aa	Known RBP	12.76	□□□□□ -0.37
PTPN20-222	ENST00000509774	USP17L3	A6NCW0	530 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	USP17L4	A6NCW7	530 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	ARHGAP33	O14559	1287 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	EVI5	O60447	810 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	UFL1	O94874	794 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	BMP8B	P34820	402 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	MUC3A	Q02505	3323 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	LDHAL6A	Q6ZMR3	332 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	USP17L1	Q7RTZ2	530 aa		12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.75	□□□□□ -0.37
PTPN20-222	ENST00000509774	ZBTB40	Q9NUA8	1239 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms