RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 TBC1D22AQ8WUA7 517 aa12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 TRIM47Q96LD4 638 aa12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 ANP32CO43423 234 aa12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 KIF22Q14807 665 aa12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 ZCCHC17Q9NP64 241 aaKnown RBP12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 LAMA3Q16787 3333 aa12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
CYSTM1-203ENST00000509589 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 FGFR2P21802 821 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 PSMC4P43686 418 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 MOGSQ13724 837 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 ZNF341Q9BYN7 854 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
CYSTM1-203ENST00000509589 PDHXO00330 501 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 OSBPP22059 807 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 PPATQ06203 517 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 TCP10Q12799 353 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 NFIAQ12857 509 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 DIXDC1Q155Q3 683 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 HHIPL2Q6UWX4 724 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
CYSTM1-203ENST00000509589 MAST3O60307 1309 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 GNRH1P01148 92 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 PRMT2P55345 433 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 PUM3Q15397 648 aaKnown RBP12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 FAM151AQ8WW52 585 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 ZNF112Q9UJU3 913 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 KCNH4Q9UQ05 1017 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 DAGLAQ9Y4D2 1042 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 PTPRFP10586 1907 aa12.91□□□□□ -0.34
CYSTM1-203ENST00000509589 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 CYP2C8P10632 490 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 CCL5P13501 91 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 PRDX5P30044 214 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 GRK4P32298 578 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 PRKCZQ05513 592 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 UBE2Q1Q7Z7E8 422 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 ZFPM1Q8IX07 1006 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 RAET1EQ8TD07 263 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 DPF3Q92784 378 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 SIL1Q9H173 461 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 FAM198AQ9UFP1 575 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 SUGT1Q9Y2Z0 365 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 ATAD5Q96QE3 1844 aa12.9□□□□□ -0.34
CYSTM1-203ENST00000509589 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 GJA8P48165 433 aa12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 GPAT2Q6NUI2 795 aa12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 GABRQQ9UN88 632 aa12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
CYSTM1-203ENST00000509589 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 GJB1P08034 283 aa12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 SLURP2P0DP57 97 aa12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 BCRP11274 1271 aa12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 NOL9Q5SY16 702 aaKnown RBP12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 RNF208Q9H0X6 261 aa12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 ATRNL1Q5VV63 1379 aa12.88□□□□□ -0.35
CYSTM1-203ENST00000509589 EYA2O00167 538 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 SLC5A1P13866 664 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 HOXD10P28358 340 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 LPIN2Q92539 896 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 PARK7Q99497 189 aaKnown RBP12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 UNC93B1Q9H1C4 597 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 ZNF521Q96K83 1311 aa12.87□□□□□ -0.35
CYSTM1-203ENST00000509589 PHF20L1A8MW92 1017 aa12.86□□□□□ -0.35
CYSTM1-203ENST00000509589 FCGRTP55899 365 aa12.86□□□□□ -0.35
CYSTM1-203ENST00000509589 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
CYSTM1-203ENST00000509589 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
CYSTM1-203ENST00000509589 U2AF1L4Q8WU68 220 aaKnown RBP12.86□□□□□ -0.35
CYSTM1-203ENST00000509589 COL6A3P12111 3177 aa12.86□□□□□ -0.35
CYSTM1-203ENST00000509589 CXCL11O14625 94 aa12.85□□□□□ -0.35
CYSTM1-203ENST00000509589 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
CYSTM1-203ENST00000509589 ELNP15502 786 aa12.85□□□□□ -0.35
CYSTM1-203ENST00000509589 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
CYSTM1-203ENST00000509589 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
CYSTM1-203ENST00000509589 PTPRCP08575 1304 aa12.85□□□□□ -0.35
CYSTM1-203ENST00000509589 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms