RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 ZNF296Q8WUU4 475 aaPredicted RBP8.38□□□□□ -1.07
CLGN-203ENST00000509477 RPGRQ92834 1020 aaKnown RBP8.38□□□□□ -1.07
CLGN-203ENST00000509477 CSRNP1Q96S65 589 aa8.38□□□□□ -1.07
CLGN-203ENST00000509477 KCTD15Q96SI1 283 aaPredicted RBP8.38□□□□□ -1.07
CLGN-203ENST00000509477 NIP7Q9Y221 180 aaKnown RBP eCLIP8.38□□□□□ -1.07
CLGN-203ENST00000509477 NPC1L1Q9UHC9 1359 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 COL4A5P29400 1685 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 SIAH2O43255 324 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 ATP9BO43861 1147 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 TBC1D8O95759 1140 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 RFX1P22670 979 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 AOC3Q16853 763 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 PHTF2Q8N3S3 785 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 PGAP2Q9UHJ9 254 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 MAP4K5Q9Y4K4 846 aa8.37□□□□□ -1.07
CLGN-203ENST00000509477 KLRG2A4D1S0 409 aaPredicted RBP8.36□□□□□ -1.07
CLGN-203ENST00000509477 A1BGP04217 495 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 RAB15P59190 212 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 CXCL9Q07325 125 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 TNIP1Q15025 636 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 DLK2Q6UY11 383 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 MPNDQ8N594 471 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 DCPSQ96C86 337 aaKnown RBP8.36□□□□□ -1.07
CLGN-203ENST00000509477 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 ZNRF3Q9ULT6 936 aa8.36□□□□□ -1.07
CLGN-203ENST00000509477 HEG1Q9ULI3 1381 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 CDHR2Q9BYE9 1310 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 MRC1P22897 1456 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
CLGN-203ENST00000509477 ESPNB1AK53 854 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 RAD17O75943 681 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 HIRAP54198 1017 aaPredicted RBP8.35□□□□□ -1.07
CLGN-203ENST00000509477 PRR20EP86478 221 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 PRR20CP86479 221 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 PRR20DP86480 221 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 PRR20BP86481 221 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 PRR20AP86496 221 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 INTS3Q68E01 1043 aaKnown RBP8.35□□□□□ -1.07
CLGN-203ENST00000509477 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 SND1Q7KZF4 910 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLGN-203ENST00000509477 ZNF496Q96IT1 587 aaPredicted RBP8.35□□□□□ -1.07
CLGN-203ENST00000509477 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 PKD2L1Q9P0L9 805 aa8.35□□□□□ -1.07
CLGN-203ENST00000509477 CNOT7Q9UIV1 285 aaKnown RBP8.35□□□□□ -1.07
CLGN-203ENST00000509477 MAFBQ9Y5Q3 323 aaPredicted RBP8.35□□□□□ -1.07
CLGN-203ENST00000509477 ADM5C9JUS6 153 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 GPR25O00155 361 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 ALDH1A1P00352 501 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 GRM5P41594 1212 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
CLGN-203ENST00000509477 TEFQ10587 303 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 MAP7D1Q3KQU3 841 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 PLPP7Q8NBV4 271 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 RBM17Q96I25 401 aaKnown RBP8.34□□□□□ -1.07
CLGN-203ENST00000509477 FMNL2Q96PY5 1086 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
CLGN-203ENST00000509477 UBR2Q8IWV8 1755 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 USP17L5A8MUK1 530 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 FKTNO75072 461 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 ADH1CP00326 375 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 TBC1D10BQ4KMP7 808 aaPredicted RBP8.33□□□□□ -1.08
CLGN-203ENST00000509477 ZNF790Q6PG37 636 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 RASAL3Q86YV0 1011 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 SNIP1Q8TAD8 396 aaKnown RBP8.33□□□□□ -1.08
CLGN-203ENST00000509477 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
CLGN-203ENST00000509477 NYXQ9GZU5 481 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 VPS33BQ9H267 617 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
CLGN-203ENST00000509477 SNED1Q8TER0 1413 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 TTC24A2A3L6 582 aaPredicted RBP8.32□□□□□ -1.08
CLGN-203ENST00000509477 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
CLGN-203ENST00000509477 FSHRP23945 695 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 NR5A1Q13285 461 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 CYP4X1Q8N118 509 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 VRTNQ9H8Y1 702 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 TRIM17Q9Y577 477 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
CLGN-203ENST00000509477 SHTN1A0MZ66 631 aa8.31□□□□□ -1.08
CLGN-203ENST00000509477 LZTS3O60299 673 aaPredicted RBP8.31□□□□□ -1.08
CLGN-203ENST00000509477 GDF9O60383 454 aa8.31□□□□□ -1.08
CLGN-203ENST00000509477 DGAT1O75907 488 aa8.31□□□□□ -1.08
CLGN-203ENST00000509477 HMOX1P09601 288 aa8.31□□□□□ -1.08
CLGN-203ENST00000509477 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
CLGN-203ENST00000509477 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
CLGN-203ENST00000509477 DPP8Q6V1X1 898 aaPredicted RBP8.31□□□□□ -1.08
CLGN-203ENST00000509477 PLEKHM2Q8IWE5 1019 aa8.31□□□□□ -1.08
CLGN-203ENST00000509477 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
CLGN-203ENST00000509477 DHX9Q08211 1270 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms