RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
HMGCL-208ENST00000509389 LRRFIP2Q9Y608 721 aaKnown RBP18.11■□□□□ 0.49
HMGCL-208ENST00000509389 GTF2A2P52657 109 aa18.1■□□□□ 0.49
HMGCL-208ENST00000509389 CD99L2Q8TCZ2 262 aa18.1■□□□□ 0.49
HMGCL-208ENST00000509389 OTUD5Q96G74 571 aa18.1■□□□□ 0.49
HMGCL-208ENST00000509389 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
HMGCL-208ENST00000509389 CCL15-CCL14A0A0B4J2E2 113 aa18.09■□□□□ 0.49
HMGCL-208ENST00000509389 SPDYE5A6NIY4 337 aa18.09■□□□□ 0.49
HMGCL-208ENST00000509389 CCL15Q16663 113 aa18.09■□□□□ 0.49
HMGCL-208ENST00000509389 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
HMGCL-208ENST00000509389 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
HMGCL-208ENST00000509389 PA2G4Q9UQ80 394 aaKnown RBP18.09■□□□□ 0.49
HMGCL-208ENST00000509389 HDAC5Q9UQL6 1122 aa18.09■□□□□ 0.49
HMGCL-208ENST00000509389 SNCAIPQ9Y6H5 919 aa18.09■□□□□ 0.49
HMGCL-208ENST00000509389 RPAP1Q9BWH6 1393 aaPredicted RBP18.08■□□□□ 0.49
HMGCL-208ENST00000509389 PRDX5P30044 214 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 IL15P40933 162 aaPredicted RBP18.08■□□□□ 0.49
HMGCL-208ENST00000509389 SP3Q02447 781 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 AAMPQ13685 434 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 DIXDC1Q155Q3 683 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 PANK1Q8TE04 598 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 WRNIP1Q96S55 665 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 MEIS3Q99687 375 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 GNL3LQ9NVN8 582 aaKnown RBP18.08■□□□□ 0.49
HMGCL-208ENST00000509389 DAGLAQ9Y4D2 1042 aa18.08■□□□□ 0.49
HMGCL-208ENST00000509389 ERO1BQ86YB8 467 aa18.07■□□□□ 0.48
HMGCL-208ENST00000509389 FAM43AQ8N2R8 423 aa18.07■□□□□ 0.48
HMGCL-208ENST00000509389 ZKSCAN4Q969J2 545 aaPredicted RBP18.07■□□□□ 0.48
HMGCL-208ENST00000509389 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
HMGCL-208ENST00000509389 PTPN22Q9Y2R2 807 aa18.07■□□□□ 0.48
HMGCL-208ENST00000509389 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
HMGCL-208ENST00000509389 PHKA1P46020 1223 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 CAP1Q01518 475 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 MVPQ14764 893 aaKnown RBP18.06■□□□□ 0.48
HMGCL-208ENST00000509389 TAF1CQ15572 869 aaPredicted RBP18.06■□□□□ 0.48
HMGCL-208ENST00000509389 DCAF15Q66K64 600 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
HMGCL-208ENST00000509389 CDC42EP5Q6NZY7 148 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 FAM151AQ8WW52 585 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 EFCC1Q9HA90 598 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 AK9Q5TCS8 1911 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 SALL1Q9NSC2 1324 aa18.06■□□□□ 0.48
HMGCL-208ENST00000509389 SEMA3EO15041 775 aa18.05■□□□□ 0.48
HMGCL-208ENST00000509389 SLC34A2O95436 690 aa18.05■□□□□ 0.48
HMGCL-208ENST00000509389 ADORA1P30542 326 aa18.05■□□□□ 0.48
HMGCL-208ENST00000509389 ZNF341Q9BYN7 854 aa18.05■□□□□ 0.48
HMGCL-208ENST00000509389 ZFYVE28Q9HCC9 887 aa18.05■□□□□ 0.48
HMGCL-208ENST00000509389 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
HMGCL-208ENST00000509389 CETPP11597 493 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 TCP10Q12799 353 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 NFIAQ12857 509 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 CCDC102BQ68D86 513 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 MYH2Q9UKX2 1941 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 IRF6O14896 467 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 ZBTB22O15209 634 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 INPP5BP32019 993 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 PPIL2Q13356 520 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
HMGCL-208ENST00000509389 HTTP42858 3142 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 GNAI3P08754 354 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 TIMM10P62072 90 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
HMGCL-208ENST00000509389 FAM198AQ9UFP1 575 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
HMGCL-208ENST00000509389 KIAA0100Q14667 2235 aaKnown RBP18.02■□□□□ 0.48
HMGCL-208ENST00000509389 BTBD19C9JJ37 291 aa18.02■□□□□ 0.47
HMGCL-208ENST00000509389 SRGAP3O43295 1099 aa18.02■□□□□ 0.47
HMGCL-208ENST00000509389 PPATQ06203 517 aa18.02■□□□□ 0.47
HMGCL-208ENST00000509389 MTX1Q13505 466 aa18.02■□□□□ 0.47
HMGCL-208ENST00000509389 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.47
HMGCL-208ENST00000509389 ZCCHC17Q9NP64 241 aaKnown RBP18.02■□□□□ 0.47
HMGCL-208ENST00000509389 POTEFA5A3E0 1075 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 TFCP2Q12800 502 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 RASGRF1Q13972 1273 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 ZFPM1Q8IX07 1006 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 ZGPATQ8N5A5 531 aaKnown RBP18.01■□□□□ 0.47
HMGCL-208ENST00000509389 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 ARMC5Q96C12 935 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
HMGCL-208ENST00000509389 RBBP6Q7Z6E9 1792 aaKnown RBP18■□□□□ 0.47
HMGCL-208ENST00000509389 A0A1B0GUL7 405 aa18■□□□□ 0.47
HMGCL-208ENST00000509389 TLR2O60603 784 aa18■□□□□ 0.47
HMGCL-208ENST00000509389 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
HMGCL-208ENST00000509389 ARHGEF6Q15052 776 aa18■□□□□ 0.47
HMGCL-208ENST00000509389 PRPF38BQ5VTL8 546 aaKnown RBP18■□□□□ 0.47
HMGCL-208ENST00000509389 XAGE2Q96GT9 111 aa18■□□□□ 0.47
HMGCL-208ENST00000509389 GAKO14976 1311 aa18■□□□□ 0.47
HMGCL-208ENST00000509389 ZSWIM8A7E2V4 1837 aa17.99■□□□□ 0.47
HMGCL-208ENST00000509389 NOL9Q5SY16 702 aaKnown RBP17.99■□□□□ 0.47
HMGCL-208ENST00000509389 IDI2Q9BXS1 227 aa17.99■□□□□ 0.47
HMGCL-208ENST00000509389 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
HMGCL-208ENST00000509389 AKAP2Q9Y2D5 859 aa17.99■□□□□ 0.47
HMGCL-208ENST00000509389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.99■□□□□ 0.47
HMGCL-208ENST00000509389 PDS5AQ29RF7 1337 aaKnown RBP17.99■□□□□ 0.47
HMGCL-208ENST00000509389 DOCK2Q92608 1830 aa17.98■□□□□ 0.47
HMGCL-208ENST00000509389 RGS3P49796 1198 aa17.98■□□□□ 0.47
HMGCL-208ENST00000509389 DZIP1Q86YF9 867 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms