RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 FAM83GA6ND36 823 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 TMEM232C9JQI7 657 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 JAK2O60674 1132 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 CLSTN1O94985 981 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 CCDC175P0C221 793 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 EZRP15311 586 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 RPS6KB1P23443 525 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 GCKP35557 465 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 GNGT1P63211 74 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 RCSD1Q6JBY9 416 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 MICALCLQ6ZW33 695 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 DDX20Q9UHI6 824 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 SAMM50Q9Y512 469 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 RBM8AQ9Y5S9 174 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 CTAGE9A4FU28 777 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 A6NNZ2 444 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 SNUPNO95149 360 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 GGCXP38435 758 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 ME1P48163 572 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 RBBP5Q15291 538 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 TUBB8Q3ZCM7 444 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 CCDC40Q4G0X9 1142 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 USP28Q96RU2 1077 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 FTOQ9C0B1 505 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 EHD4Q9H223 541 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 NEDD4P46934 1319 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 TNRQ92752 1358 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 A0A1W2PQ27 194 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 A0A1W2PQ64 194 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 A0A1W2PQD8 194 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 ZNF202O95125 648 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 SLC3A2P08195 630 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 MYL5Q02045 173 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 ACTN3Q08043 901 aaPredicted RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 STK3Q13188 491 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 SNCBQ16143 134 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 NAA16Q6N069 864 aaPredicted RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 RIN2Q8WYP3 895 aaPredicted RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 DESI2Q9BSY9 194 aa11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 CPSF2Q9P2I0 782 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-207ENST00000509092 F6X3S4 739 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 MTX1Q13505 466 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 MAB21L3Q8N8X9 362 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 CCDC148Q8NFR7 591 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 USP42Q9H9J4 1324 aaKnown RBP11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 BIN1O00499 593 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 SLC27A2O14975 620 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 CDR1P51861 262 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 NAA25Q14CX7 972 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 CDCA2Q69YH5 1023 aaPredicted RBP11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 ADALQ6DHV7 355 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 NOA1Q8NC60 698 aaKnown RBP11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 SH3GL2Q99962 352 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 KIF9Q9HAQ2 790 aa11.39□□□□□ -0.59
PDGFRA-207ENST00000509092 AGPSO00116 658 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 TULP1O00294 542 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 CHL1O00533 1208 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 NDUFAB1O14561 156 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 NDUFA8P51970 172 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 TMEM132EQ6IEE7 984 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 KIAA1328Q86T90 577 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 PDILTQ8N807 584 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 SLC40A1Q9NP59 571 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 IRAK4Q9NWZ3 460 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 MAP3K5Q99683 1374 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 A0A1B0GVL5 298 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 SKOR1P84550 965 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 DRP2Q13474 957 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 ZNF569Q5MCW4 686 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 CEP57Q86XR8 500 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 MAP4K1Q92918 833 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 LZTFL1Q9NQ48 299 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 BATF3Q9NR55 127 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 INTS13Q9NVM9 706 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 FANCLQ9NW38 375 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
PDGFRA-207ENST00000509092 GOLGA8KD6RF30 607 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 GLRX3O76003 335 aaKnown RBP11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 RPS6KA3P51812 740 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 USP14P54578 494 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 COL9A3Q14050 684 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 G2E3Q7L622 706 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms