RNA–Protein interactions for RNA: ENST00000508716.1

SKIV2L2-208, Transcript of Superkiller viralicidic activity 2-like 2, human

TSL 2

Gene SKIV2L2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L2-208	ENST00000508716	PPP1R12C	Q9BZL4	782 aa		10.88	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	APP	P05067	770 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ADD2	P35612	726 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CCDC102B	Q68D86	513 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ZNF34	Q8IZ26	560 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	VGLL2	Q8N8G2	317 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	NCOA7	Q8NI08	942 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CLSTN2	Q9H4D0	955 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	PIH1D3	Q9NQM4	214 aa	Known RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	LRP6	O75581	1613 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	COL14A1	Q05707	1796 aa	Known RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	KLF18	A0A0U1RQI7	1052 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ADAMTS2	O95450	1211 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ZNF16	P17020	682 aa	Predicted RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ADD1	P35611	737 aa	Known RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	PHKA1	P46020	1223 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	FBXL16	Q8N461	479 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	DDX12P	Q92771	950 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ACSBG1	Q96GR2	724 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ZNF396	Q96N95	335 aa	Predicted RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ZNF830	Q96NB3	372 aa	Predicted RBP	10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	MRVI1	Q9Y6F6	885 aa		10.87	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	SALL1	Q9NSC2	1324 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	SUSD4	Q5VX71	490 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	PPP2R2D	Q66LE6	453 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	RAB11FIP4	Q86YS3	637 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	FAM200A	Q8TCP9	573 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	MROH5	Q6ZUA9	1318 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ZNF532	Q9HCE3	1301 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	GOLGA8B	A8MQT2	603 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	AP5Z1	O43299	807 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	UQCRFS1P1	P0C7P4	283 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	FDPS	P14324	419 aa	Known RBP	10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ATP6V1A	P38606	617 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	EVC	P57679	992 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	TRDN	Q13061	729 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	PUM3	Q15397	648 aa	Known RBP	10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	DDB1	Q16531	1140 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ANO6	Q4KMQ2	910 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	SASS6	Q6UVJ0	657 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	LPIN2	Q92539	896 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	USP28	Q96RU2	1077 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	RCOR1	Q9UKL0	485 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CARMIL3	Q8ND23	1372 aa		10.86	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CPLX1	O14810	134 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	DHX16	O60231	1041 aa	Known RBP	10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	EIF5	P55010	431 aa	Known RBP	10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ANTXR2	P58335	489 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	KIAA2012	Q0VF49	1180 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	UBE3C	Q15386	1083 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	INTS5	Q6P9B9	1019 aa	Known RBP	10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	LUZP1	Q86V48	1076 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CCAR1	Q8IX12	1150 aa	Known RBP	10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	MPHOSPH8	Q99549	860 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CCDC87	Q9NVE4	849 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	NWD2	Q9ULI1	1742 aa		10.85	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	PDE6A	P16499	860 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ARID4A	P29374	1257 aa	Predicted RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CRKL	P46109	303 aa	Known RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	MAP3K9	P80192	1104 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	OTUD7B	Q6GQQ9	843 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	UTP14A	Q9BVJ6	771 aa	Known RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	TTC12	Q9H892	705 aa	Predicted RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	WWC3	Q9ULE0	1092 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	SNAP23	O00161	211 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	SLC5A1	P13866	664 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ME1	P48163	572 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ATL3	Q6DD88	541 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	RBM43	Q6ZSC3	357 aa	Known RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	AIDA	Q96BJ3	306 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	C8orf76	Q96K31	380 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	CBX8	Q9HC52	389 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	SEC31B	Q9NQW1	1179 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ORC3	Q9UBD5	711 aa	Predicted RBP	10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	HPS5	Q9UPZ3	1129 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	NUP98	P52948	1817 aa		10.84	□□□□□ -0.67
SKIV2L2-208	ENST00000508716	ANKRD36C	Q5JPF3	1778 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	TPM2	P07951	284 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	FGFR2	P21802	821 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	CCDC73	Q6ZRK6	1079 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	TBC1D10C	Q8IV04	446 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	SPATA5	Q8NB90	893 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	SPC24	Q8NBT2	197 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	C8orf37	Q96NL8	207 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	NBPF3	Q9H094	633 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	LIMD1	Q9UGP4	676 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	DENND2A	Q9ULE3	1009 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	LOC102724428	A0A0B4J2F2	783 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	LMOD1	P29536	600 aa	Predicted RBP	10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	SIK1	P57059	783 aa		10.83	□□□□□ -0.68
SKIV2L2-208	ENST00000508716	GOLPH3L	Q9H4A5	285 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms